RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 UBTD2Q8WUN7 234 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 FAM151AQ8WW52 585 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 THAP4Q8WY91 577 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 MYLPFQ96A32 169 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 ORAI1Q96D31 301 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 PABPC5Q96DU9 382 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 FAM120BQ96EK7 910 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 KTI12Q96EK9 354 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 C11orf24Q96F05 449 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 IMP4Q96G21 291 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 DIRAS2Q96HU8 199 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 PRMT6Q96LA8 375 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 NECTIN4Q96NY8 510 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 FRG2BQ96QU4 278 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 C12orf57Q99622 126 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 MAPKAP1Q9BPZ7 522 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 KCNS3Q9BQ31 491 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 WDR77Q9BQA1 342 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 MRPL45Q9BRJ2 306 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 C7orf50Q9BRJ6 194 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 CCM2Q9BSQ5 444 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 SYT17Q9BSW7 474 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 KATNB1Q9BVA0 655 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 FICDQ9BVA6 458 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 BBS2Q9BXC9 721 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 PRRG3Q9BZD7 231 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 ZNF436Q9C0F3 470 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 SLC25A51Q9H1U9 297 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 FN3KQ9H479 309 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 ESRP2Q9H6T0 727 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 RPF1Q9H9Y2 349 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 UCK1Q9HA47 277 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 SLC28A3Q9HAS3 691 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 NMUR1Q9HB89 426 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 ABCB9Q9NP78 766 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 RASSF1Q9NS23 344 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 PIGVQ9NUD9 493 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 HPF1Q9NWY4 346 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 TXNL4BQ9NX01 149 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 DCAF16Q9NXF7 216 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 COQ3Q9NZJ6 369 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 NUDT4Q9NZJ9 180 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 COPZ2Q9P299 210 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 MARCH4Q9P2E8 410 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 NLKQ9UBE8 527 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 UPB1Q9UBR1 384 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 HACL1Q9UJ83 578 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 SLC25A13Q9UJS0 675 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 FBXW11Q9UKB1 542 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 POMT2Q9UKY4 750 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 TMCC3Q9ULS5 477 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 MGAT4AQ9UM21 535 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 BAIAP2Q9UQB8 552 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 GINS2Q9Y248 185 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 SAMHD1Q9Y3Z3 626 aaKnown RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 POLR3HQ9Y535 204 aaPredicted RBP2.98□□□□□ -1.93
HERC1-203ENST00000558532 NUBP2Q9Y5Y2 271 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 SESN1Q9Y6P5 492 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 WDR90Q96KV7 1748 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 DENND4AQ7Z401 1863 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 NOTCH4Q99466 2003 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 BRWD3Q6RI45 1802 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 DOCK4Q8N1I0 1966 aa2.98□□□□□ -1.93
HERC1-203ENST00000558532 PTPRDP23468 1912 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 TRAV19A0A0A6YYK7 116 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 A0A0B4J203 849 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 FAM240BA0A1B0GVZ2 78 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 TRDV1A0A1B0GX56 115 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 A0A1W2PQL4 384 aaPredicted RBP2.97□□□□□ -1.93
HERC1-203ENST00000558532 TMEM129A0AVI4 362 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 PLSCR5A0PG75 271 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 NEDD8-MDP1E9PL57 170 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SMLR1H3BR10 107 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 J3KR12 359 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 M0R233 179 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 HAS3O00219 553 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 OR7A17O14581 309 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 GPR171O14626 319 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 LDB2O43679 373 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SLC19A2O60779 497 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 PRAF2O60831 178 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SC5DO75845 299 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 AQP8O94778 261 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SOX30O94993 753 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 CCNB2O95067 398 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 CDRT1O95170 752 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 KCNK5O95279 499 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 DDAH2O95865 285 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 MT-CYBP00156 380 aaPredicted RBP2.97□□□□□ -1.93
HERC1-203ENST00000558532 DHFRP00374 187 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SOD1P00441 154 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 EPOP01588 193 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 JCHAINP01591 159 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 S100A8P05109 93 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 HEXAP06865 529 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 TSPAN19P0C672 248 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 STAG3L1P0CL83 205 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 PRPS2P11908 318 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 CPN1P15169 458 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms