RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KEAP1Q14145 624 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 CLINT1Q14677 625 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 NPWQ8N729 165 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SERINC2Q96SA4 455 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ABRACLQ9P1F3 81 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 NPC1O15118 1278 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FABP7O15540 132 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 F2P00734 622 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ADARB1P78563 741 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
SPG11-210ENST00000558319 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 C1orf226A1L170 272 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 NAP1L6A6NFF2 107 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 PPP3CBP16298 524 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FOLR3P41439 243 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 OR1D4P47884 311 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.313e-7■■□□□ 13
SPG11-210ENST00000558319 B3GLCTQ6Y288 498 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SULF2Q8IWU5 870 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ZNF610Q8N9Z0 462 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 SFXN5Q8TD22 340 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 CDS1Q92903 461 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 ADAM19Q9H013 955 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 TAS2R16Q9NYV7 291 aa13.11□□□□□ -0.31
SPG11-210ENST00000558319 FAM183AA6NL82 134 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 PHYHO14832 338 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ATG12O94817 140 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ZNF28P17035 718 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 NPY5RQ15761 445 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 RBMXL1Q96E39 390 aaKnown RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SURF4O15260 269 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 CBX7O95931 251 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 TIMP2P16035 220 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SERPINA2P20848 420 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 CXCR4P61073 352 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SLC22A6Q4U2R8 563 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ZNF789Q5FWF6 425 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 BAGE3Q86Y29 109 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 BAGE2Q86Y30 109 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 PRAMEF20Q5VT98 475 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 HSFX1Q9UBD0 423 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 J3KTA2 159 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 TP53P04637 393 aaPredicted RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 RAB3AP20336 220 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SELENOWP63302 87 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SPOCK1Q08629 439 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 STEAP4Q687X5 459 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 BPHLQ86WA6 291 aaPredicted RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 OR51D1Q8NGF3 324 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 LUZP4Q9P127 313 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
SPG11-210ENST00000558319 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ILKQ13418 452 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 PLXDC1Q8IUK5 500 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 TAAR8Q969N4 342 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 ZNF75AQ96N20 296 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 OR11A1Q9GZK7 315 aa13.1□□□□□ -0.31
SPG11-210ENST00000558319 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 WWTR1Q9GZV5 400 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 ZFP57Q9NU63 452 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 EFCAB7A8K855 629 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 SRPX2O60687 465 aaPredicted RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 TAP2Q03519 686 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 ZNF691Q5VV52 312 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 LETMD1Q6P1Q0 360 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 OSGIN2Q9Y236 505 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 SMAD6O43541 496 aaKnown RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 TNK1Q13470 666 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms