RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 IVLP07476 585 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CLUP10909 449 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 FUT1P19526 365 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CALB2P22676 271 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CPN2P22792 545 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 U2AF2P26368 475 aaKnown RBP eCLIP2.28□□□□□ -2.045e-9■■■■□ 19.4
SPG11-206ENST00000558093 CCND2P30279 289 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 SLC11A1P49279 550 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 POU3F4P49335 361 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ARPC4P59998 168 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 PPIDQ08752 370 aaKnown RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 SPP2Q13103 211 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 SCGB2A2Q13296 93 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 PDIA5Q14554 519 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CARTPTQ16568 116 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 BCL7AQ4VC05 210 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 PRAMEF7Q5VXH5 474 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 C8orf74Q6P047 294 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 WDR88Q6ZMY6 472 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 EFL1Q7Z2Z2 1120 aaKnown RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 ZNF410Q86VK4 478 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 GPBP1Q86WP2 473 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ZNF573Q86YE8 665 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TGIF2LYQ8IUE0 185 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 BBS1Q8NFJ9 593 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 DNAJA4Q8WW22 397 aaPredicted RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 SELENOMQ8WWX9 145 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 NT5C3BQ969T7 300 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 MARC2Q969Z3 335 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TMEM45BQ96B21 275 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TMEM186Q96B77 213 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ELSPBP1Q96BH3 223 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 SLC25A38Q96DW6 304 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 DNAJA3Q96EY1 480 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TPD52L3Q96J77 140 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ZNF285Q96NJ3 590 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 TECTBQ96PL2 329 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ALS2CR12Q96Q35 445 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 PLIN2Q99541 437 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 MTG1Q9BT17 334 aaPredicted RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 DPH7Q9BTV6 452 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 RAB17Q9H0T7 212 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 AZI2Q9H6S1 392 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 METTL7AQ9H8H3 244 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 NUDT15Q9NV35 164 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 ELOVL2Q9NXB9 296 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 LHX3Q9UBR4 397 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 MIOXQ9UGB7 285 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CHRNA9Q9UGM1 479 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 CA5BQ9Y2D0 317 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 AP4B1Q9Y6B7 739 aa2.28□□□□□ -2.04
SPG11-206ENST00000558093 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.28□□□□□ -2.04
SPG11-206ENST00000558093 SH3TC1Q8TE82 1336 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 A0A075B6Q4 140 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 A0A087WZY1 265 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 A0A1B0GTQ1 180 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 FAM230AA0A1W2PPH8 454 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 HEATR9A2RTY3 570 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 BTBD17A6NE02 478 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 F8WDY8 70 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA8MH3BSY2 632 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PDLIM1O00151 329 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 WWP2O00308 870 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PRRG1O14668 218 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 AKR7A2O43488 359 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 SULT1B1O43704 296 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 NME2P1O60361 137 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TOM1L1O75674 476 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CLPXO76031 633 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 IL1BP01584 269 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 POU2F1P14859 743 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 GNSP15586 552 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CYP2F1P24903 491 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 AXLP30530 894 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PPP1R2P41236 205 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CCL11P51671 97 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 SGSHP51688 502 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 UCNP55089 124 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 MTTPP55157 894 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PRMT2P55345 433 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 RWDD2BP57060 319 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 SSTP61278 116 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 IL9RQ01113 521 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 KDSRQ06136 332 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CKAP4Q07065 602 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 BCL2L1Q07817 233 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 SRSF5Q13243 272 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 RAB35Q15286 201 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CHRNA6Q15825 494 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CAMK4Q16566 473 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 LDLRAP1Q5SW96 308 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 ATL3Q6DD88 541 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PPP1R2P3Q6NXS1 205 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TTC23LQ6PF05 361 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TMEM179BQ7Z7N9 219 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PARGQ86W56 976 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 C12orf56Q8IXR9 622 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 OFCC1Q8IZS5 231 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 BATF2Q8N1L9 274 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms