RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 DCST1Q5T197 706 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 PRAMEF8Q5VWM4 474 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 PRAMEF7Q5VXH5 474 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 HBMQ6B0K9 141 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 RTL6Q6ICC9 239 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 C3orf33Q6P1S2 294 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 CBLN3Q6UW01 205 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF550Q7Z398 422 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 LILRA2Q8N149 483 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 RPRMLQ8N4K4 120 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 OR2V1Q8NHB1 315 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-223ENST00000557511 FBXO27Q8NI29 283 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 GPR119Q8TDV5 335 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ZHX1-C8orf76Q96EF9 292 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ARSGQ96EG1 525 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 TMEM19Q96HH6 336 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 KLHL15Q96M94 604 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 FAM107BQ9H098 131 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 SLC38A1Q9H2H9 487 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 A4GALTQ9NPC4 353 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 EXOSC3Q9NQT5 275 aaKnown RBP7.51□□□□□ -1.21
PSEN1-223ENST00000557511 KLHL28Q9NXS3 571 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 Q9UFV3 132 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-223ENST00000557511 PRDM4Q9UKN5 801 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ICAM5Q9UMF0 924 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ANGPT4Q9Y264 503 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 L3MBTL1Q9Y468 752 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF175Q9Y473 711 aa7.51□□□□□ -1.21
PSEN1-223ENST00000557511 PRORSD1PA6NEY8 169 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CFAP73A6NFT4 308 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 RGS9O75916 674 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 RCBTB2O95199 551 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 IL18BPO95998 194 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 NPPAP01160 153 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CRHP06850 196 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CHRM4P08173 479 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 TFPTP0C1Z6 253 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 TFPIP10646 304 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 NID1P14543 1247 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 UQCRC1P31930 480 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SFTPDP35247 375 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 APOBEC1P41238 236 aaKnown RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 ASCL1P50553 236 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CTBP2P56545 445 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CLDN20P56880 219 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 NCALDP61601 193 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 GNGT1P63211 74 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CDK6Q00534 326 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 RBBP4Q09028 425 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 FUT5Q11128 374 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SKP2Q13309 424 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SCARB2Q14108 478 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 PON3Q15166 354 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 NDUFAF6Q330K2 333 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 PAGE3Q5JUK9 113 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 INTS11Q5TA45 600 aaKnown RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 REEP3Q6NUK4 255 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 POMZP3Q6PJE2 187 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 OLIG3Q7RTU3 272 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SPATA21Q7Z572 469 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 KIF18BQ86Y91 864 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SLC30A8Q8IWU4 369 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 DPP10Q8N608 796 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CNEP1R1Q8N9A8 125 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 C11orf65Q8NCR3 313 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 BHLHE22Q8NFJ8 381 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 TNIP2Q8NFZ5 429 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SLC26A7Q8TE54 656 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SLC25A43Q8WUT9 341 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SLC38A5Q8WUX1 472 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 OSTF1Q92882 214 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CPNE4Q96A23 557 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 INTS12Q96CB8 462 aaKnown RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 CGREF1Q99674 301 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 MDFIQ99750 246 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 TREX2Q9BQ50 279 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 UCK2Q9BZX2 261 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 PIGMQ9H3S5 423 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 TMEM185BQ9H7F4 350 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SLC6A13Q9NSD5 602 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 SELENONQ9NZV5 590 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 VAPAQ9P0L0 249 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 RPS6KB2Q9UBS0 482 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 ZNF443Q9Y2A4 671 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-223ENST00000557511 AP3M1Q9Y2T2 418 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 EMC9Q9Y3B6 208 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 NINQ8N4C6 2090 aa7.5□□□□□ -1.21
PSEN1-223ENST00000557511 LOC100653049A0A140TA62 436 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 GMNCA6NCL1 334 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 NKX2-6A6NCS4 301 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 TNFSF11O14788 317 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 MRASO14807 208 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 CXCL13O43927 109 aa7.49□□□□□ -1.21
PSEN1-223ENST00000557511 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
PSEN1-223ENST00000557511 KRT34O76011 436 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms