RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 SLCO4A1Q96BD0 722 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 PERPQ96FX8 193 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 JSRP1Q96MG2 331 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 PELOQ9BRX2 385 aaKnown RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 AMBRA1Q9C0C7 1298 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 DCAF13Q9NV06 445 aaKnown RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 ARMC1Q9NVT9 282 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 C6orf203Q9P0P8 240 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 STOML1Q9UBI4 398 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-219ENST00000556951 CAMK2AQ9UQM7 478 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 TESMINQ9Y4I5 508 aa11.47□□□□□ -0.57
PSEN1-219ENST00000556951 TENM1Q9UKZ4 2725 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 SYNDIG1LA6NDD5 238 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 TMEM247A6NEH6 219 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 A8MXE2 369 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 UPK1AO00322 258 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PLOD3O60568 738 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ARAFP10398 606 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 GDF1P27539 372 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 STT3AP46977 705 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 CASP9P55211 416 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 CDK6Q00534 326 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 SCARB2Q14108 478 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 GNA13Q14344 377 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 NTRK2Q16620 822 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PRICKLE4Q2TBC4 344 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 BICRALQ6AI39 1079 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 TNFAIP8L2Q6P589 184 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 CCDC80Q76M96 950 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 SZRD1Q7Z422 152 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 LUZP2Q86TE4 346 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PM20D2Q8IYS1 436 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ST13P4Q8IZP2 240 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PAPD5Q8NDF8 572 aaKnown RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 OR7G2Q8NG99 324 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 SLC22A8Q8TCC7 542 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ZPLD1Q8TCW7 415 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ROBO4Q8WZ75 1007 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 PPWD1Q96BP3 646 aaKnown RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 WFIKKN1Q96NZ8 548 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 GNRHR2Q96P88 292 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 DGAT2Q96PD7 388 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ACTRT3Q9BYD9 372 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 GSX2Q9BZM3 304 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 OR51I1Q9H343 314 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 DDX18Q9NVP1 670 aaKnown RBP11.46□□□□□ -0.57
PSEN1-219ENST00000556951 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 ANGPT4Q9Y264 503 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 DSCAMO60469 2012 aa11.46□□□□□ -0.57
PSEN1-219ENST00000556951 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
PSEN1-219ENST00000556951 DUXAA6NLW8 204 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 C5orf58C9J3I9 102 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 HMGN4O00479 90 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 CASKO14936 926 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 SOX30O94993 753 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 RCBTB2O95199 551 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 AGR2O95994 175 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 SERPINA1P01009 418 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 IFNA14P01570 189 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 HMGN2P05204 90 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 TFPTP0C1Z6 253 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 RPS26P62854 115 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 SF3B4Q15427 424 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■□□ 16.5
PSEN1-219ENST00000556951 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 TRMT12Q53H54 448 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 REEP3Q6NUK4 255 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 ZCCHC12Q6PEW1 402 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 FAM111BQ6SJ93 734 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 PATL1Q86TB9 770 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 PQLC1Q8N2U9 271 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 XAGE5Q8WWM1 108 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 RIT1Q92963 219 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 MAL2Q969L2 176 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 C16orf58Q96GQ5 468 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 PYURFQ96I23 114 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 RNF145Q96MT1 663 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 MS4A4EQ96PG1 132 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 PIGQQ9BRB3 760 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 DOHHQ9BU89 302 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 G6PC3Q9BUM1 346 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 SERHL2Q9H4I8 314 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 MAGIXQ9H6Y5 334 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 YY1AP1Q9H869 796 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 CXorf21Q9HAI6 301 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 MAT2BQ9NZL9 334 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 SAMD4AQ9UPU9 718 aaKnown RBP11.45□□□□□ -0.58
PSEN1-219ENST00000556951 AURKCQ9UQB9 309 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 WIF1Q9Y5W5 379 aa11.45□□□□□ -0.58
PSEN1-219ENST00000556951 PRKDCP78527 4128 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms