RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 HPDLQ96IR7 371 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 PSKH2Q96QS6 385 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 ZNF607Q96SK3 696 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 MCHR1Q99705 422 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 SLC30A2Q9BRI3 323 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 CHIAQ9BZP6 476 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 PPDPFQ9H3Y8 114 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 GLIPR2Q9H4G4 154 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 FANCFQ9NPI8 374 aa2.97□□□□□ -1.93
SCFD1-221ENST00000556534 PAK1IP1Q9NWT1 392 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-221ENST00000556534 ESYT2A0FGR8 921 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 CTAGE5O15320 804 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 DUX1O43812 170 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 JAK2O60674 1132 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RBMXP38159 391 aaKnown RBP2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RGS4P49798 205 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 NAPAP54920 295 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 OSTNP61366 133 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 NUCB2P80303 420 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RGS1Q08116 209 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 ORC2Q13416 577 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RIPK1Q13546 671 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 CCDC57Q2TAC2 916 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RABL6Q3YEC7 729 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-221ENST00000556534 TIGITQ495A1 244 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 CELF3Q5SZQ8 465 aaKnown RBP2.96□□□□□ -1.94
SCFD1-221ENST00000556534 CENPUQ71F23 418 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RNF175Q8N4F7 328 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 ALLCQ8N6M5 410 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 C7orf33Q8WU49 177 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 IL1F10Q8WWZ1 152 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 ALG12Q9BV10 488 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RNF126Q9BV68 326 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 RHOJQ9H4E5 214 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 MRPL39Q9NYK5 338 aaKnown RBP2.96□□□□□ -1.94
SCFD1-221ENST00000556534 LCMT1Q9UIC8 334 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 ANAPC7Q9UJX3 599 aa2.96□□□□□ -1.94
SCFD1-221ENST00000556534 PTCH1Q13635 1447 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 ATP10DQ9P241 1426 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 OR1F1O43749 312 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 PALMO75781 387 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 KIAA0754O94854 1291 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 CSF2P04141 144 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 HPNP05981 417 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 UGT2B4P06133 528 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 HOXC4P09017 264 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-221ENST00000556534 HBQ1P09105 142 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF17P17021 662 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 UQCRC2P22695 453 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 BDKRB1P46663 353 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 NTHL1P78549 312 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF658BQ4V348 819 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-221ENST00000556534 EIF1ADQ8N9N8 165 aaKnown RBP2.95□□□□□ -1.94
SCFD1-221ENST00000556534 NANPQ8TBE9 248 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 CNDP1Q96KN2 507 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 SDHCQ99643 169 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-221ENST00000556534 MRPS7Q9Y2R9 242 aaKnown RBP2.95□□□□□ -1.94
SCFD1-221ENST00000556534 WDR45Q9Y484 360 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 CARMIL1Q5VZK9 1371 aa2.95□□□□□ -1.94
SCFD1-221ENST00000556534 C15orf38-AP3S2A0A0A6YYH1 394 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 GSAPA4D1B5 854 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 MBLAC1A4D2B0 266 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 PP2D1A8MPX8 630 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 A8MUI8 341 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 TRIM49D1C9J1S8 452 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 PPIAL4DF5H284 164 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 K7N7A8 449 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 UBXN8O00124 270 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 ZSCAN12O43309 604 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 SNNO75324 88 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 SURF6O75683 361 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 OPN1LWP04000 364 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 HNF1AP20823 631 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 NT5EP21589 574 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 CCNE1P24864 410 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 AQP1P29972 269 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 CHI3L1P36222 383 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 CBX1P83916 185 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 TLE4Q04727 773 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 PJVKQ0ZLH3 352 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 GTF3C1Q12789 2109 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 DAZ2Q13117 558 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 EIF4EBP2Q13542 120 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 LAGE3Q14657 143 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 ATXN7L3Q14CW9 347 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 LRRC23Q53EV4 343 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF100Q8IYN0 542 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 CNIH3Q8TBE1 160 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 PNPT1Q8TCS8 783 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 ANKRD49Q8WVL7 239 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 RPL3LQ92901 407 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 SENP8Q96LD8 212 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 SECISBP2Q96T21 854 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 CITED1Q99966 193 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 DUSP16Q9BY84 665 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 DHX33Q9H6R0 707 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 NANSQ9NR45 359 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 DAZ3Q9NR90 486 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms