RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TFGQ92734 400 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 GCDHQ92947 438 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 C12orf43Q96C57 262 aaKnown RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 FAM71F1Q96KD3 344 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 RHOVQ96L33 236 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 RDH12Q96NR8 316 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 NPAS1Q99742 590 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 TMED9Q9BVK6 235 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 TMUB1Q9BVT8 246 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 NPLQ9BXD5 320 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM121BQ9BXQ6 578 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF430Q9H8G1 570 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 MAN2C1Q9NTJ4 1040 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 GFOD1Q9NXC2 390 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 SH3BP4Q9P0V3 963 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 FZD4Q9ULV1 537 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 SAMD4AQ9UPU9 718 aaKnown RBP4.75□□□□□ -1.65
TMEM260-210ENST00000556422 COL6A3P12111 3177 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 VPS13AQ96RL7 3174 aa4.75□□□□□ -1.65
TMEM260-210ENST00000556422 IGKV1-8A0A0C4DH67 115 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 FBLL1A6NHQ2 334 aaKnown RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 LRRN3E7EW58 273 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 H0Y8G0 127 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PLPP1O14494 284 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 KCNAB3O43448 404 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ACSM4P0C7M7 580 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 COMPP49747 757 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 DLX2Q07687 328 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 SCN1BQ07699 218 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 METAP1DQ6UB28 335 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 FAM180AQ6UWF9 173 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TMIGD1Q6UXZ0 262 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 VASH2Q86V25 355 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ADGRF3Q8IZF5 1079 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PARP8Q8N3A8 854 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PIP4P2Q8N4L2 257 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 POMGNT2Q8NAT1 580 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 OR5D18Q8NGL1 313 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 NDNFQ8TB73 568 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CXorf40BQ96DE9 158 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 NECAB3Q96P71 396 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CCDC3Q9BQI4 270 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 BHLHE41Q9C0J9 482 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 RAB33BQ9H082 229 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 LRRN3Q9H3W5 708 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 REEP4Q9H6H4 257 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 MYNNQ9NPC7 610 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CTPS2Q9NRF8 586 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PLSCR3Q9NRY6 295 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 DZANK1Q9NVP4 752 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 FBXO34Q9NWN3 711 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 HIF1ANQ9NWT6 349 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PTTG3PQ9NZH4 202 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 C5AR2Q9P296 337 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TAC3Q9UHF0 121 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 SCN3AQ9NY46 2000 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 M0R296 226 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF682O95780 498 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PAK4O96013 591 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 RLN2P04090 185 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 KLK1P06870 262 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 GUSBP08236 651 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CALCBP10092 127 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 LAMP2P13473 410 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 IL7RP16871 459 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 MSR1P21757 451 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CRHBPP24387 322 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 RAD23AP54725 363 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 VSX2P58304 361 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TAS2R50P59544 299 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ISL1P61371 349 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TBCEQ15813 527 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 XAF1Q6GPH4 301 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ANKRD54Q6NXT1 300 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PGBD2Q6P3X8 592 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 USP53Q70EK8 1073 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF679Q8IYX0 411 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 GPR137CQ8N3F9 429 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 LRRC18Q8N456 261 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 OR5K1Q8NHB7 308 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 PDXPQ96GD0 296 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 HSH2DQ96JZ2 352 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ELOVL1Q9BW60 279 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 RSPO3Q9BXY4 272 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-210ENST00000556422 AICDAQ9GZX7 198 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 GABARAPL1Q9H0R8 117 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 NKX2-4Q9H2Z4 354 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 SLAMF7Q9NQ25 335 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM184CQ9NVA4 438 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 C14orf105Q9NVL8 296 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 MS4A12Q9NXJ0 267 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CLEC1BQ9P126 229 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 TAAR2Q9P1P5 351 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CLEC2DQ9UHP7 191 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 ACSL6Q9UKU0 697 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CDC14AQ9UNH5 594 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 KLK4Q9Y5K2 254 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 RNF215Q9Y6U7 377 aa4.74□□□□□ -1.65
TMEM260-210ENST00000556422 CFAP54Q96N23 3096 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms