RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 GRK5P34947 590 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 GPR50Q13585 617 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 SSX1Q16384 188 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 SEC61A2Q9H9S3 476 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR2S2Q9NQN1 319 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 SIPA1L1O43166 1804 aa14.02□□□□□ -0.16
ARHGEF40-207ENST00000556399 EEF1E1-BLOC1S5C9J1V9 151 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 CLDN20P56880 219 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 ERVK-25P63136 954 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 CD300LGQ6UXG3 332 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 NKAIN4Q8IVV8 208 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 WDR92Q96MX6 357 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 FTSJ1Q9UET6 329 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 ANKRD31Q8N7Z5 1873 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 COL11A2P13942 1736 aaPredicted RBP14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 KCNE1BA0A087WTH5 132 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 A0A1W2PPL8 197 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF878C9JN71 531 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRKACAP17612 351 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 BLKP51451 505 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 CLDN12P56749 244 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 RPL22L1Q6P5R6 122 aaKnown RBP14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 INSM2Q96T92 566 aaPredicted RBP14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 CCL27Q9Y4X3 112 aa14.02□□□□□ -0.17
ARHGEF40-207ENST00000556399 PTPRFP10586 1907 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 TRBV5-3A0A0A0MS03 114 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ACOD1A6NK06 481 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 HEPACAM2A8MVW5 462 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 CCL5P13501 91 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 CD22P20273 847 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 SOX18P35713 384 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 OPRD1P41143 372 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 VEGFCP49767 419 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 EXOSC7Q15024 291 aaKnown RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 LRFN4Q6PJG9 635 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ARSKQ6UWY0 536 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF765Q7L2R6 523 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 RNF113BQ8IZP6 322 aaKnown RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 PNLDC1Q8NA58 520 aaKnown RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 NEK7Q8TDX7 302 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 SLC17A9Q9BYT1 436 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 SLC52A3Q9NQ40 469 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 POT1Q9NUX5 634 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 HMGB3O15347 200 aaKnown RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRKAR1BP31321 381 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAB2AP61019 212 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 CRMP1Q14194 572 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 TSACCQ96A04 125 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 TRABD2BA6NFA1 517 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 M0R036 132 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 IFNA21P01568 189 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 HRGP04196 525 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 PBX2P40425 430 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 PDX1P52945 283 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 CLDN2P57739 230 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRPS1P60891 318 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 FOXK2Q01167 660 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 TPBGQ13641 420 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 P2RY14Q15391 338 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 C19orf43Q9BQ61 176 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ANKRD19PQ9H560 264 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ATG4BQ9Y4P1 393 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 A0A0A6YYJ9 748 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 RHPN2P1A8MT19 583 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 WASH3PC4AMC7 463 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 SCGB1D2O95969 90 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 EGFP01133 1207 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 KCTD20Q7Z5Y7 419 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ADGRF3Q8IZF5 1079 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 TCTE3Q8IZS6 198 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 OR6V1Q8N148 313 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF417Q8TAU3 575 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 GPR148Q8TDV2 347 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 ISYNA1Q9NPH2 558 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 FKBP14Q9NWM8 211 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 COPS3Q9UNS2 423 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 CAMK2AQ9UQM7 478 aa14.01□□□□□ -0.17
ARHGEF40-207ENST00000556399 LY75O60449 1722 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF705EA8MWA4 302 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAD1O60671 282 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 KCNJ13O60928 360 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAB3DO95716 219 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 HCKP08631 526 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 AKAIN1P0CW23 69 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RNH1P13489 461 aaKnown RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 CBX5P45973 191 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 SIRPAP78324 504 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 LINC01599Q8WXQ3 324 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 MED18Q9BUE0 208 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 GLS2Q9UI32 602 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 TAF1LQ8IZX4 1826 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 KIAA0355O15063 1070 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 PVALBP20472 110 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RIDAP52758 137 aaKnown RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RASGEF1BQ0VAM2 473 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms