RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CDK6Q00534 326 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 SRYQ05066 204 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 GNA13Q14344 377 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CAPRIN1Q14444 709 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 QPRTQ15274 297 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 SF3B4Q15427 424 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRP54-210ENST00000556380 MAPRE2Q15555 327 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 RIPPLY2Q5TAB7 128 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 REP15Q6BDI9 236 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 POMZP3Q6PJE2 187 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CPLX4Q7Z7G2 160 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 GGNQ86UU5 652 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CALHM3Q86XJ0 350 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 VRK2Q86Y07 508 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 GRAMD2AQ8IUY3 354 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CCDC71Q8IV32 467 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 LIX1LQ8IVB5 337 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 PEX5LQ8IYB4 626 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CLIP4Q8N3C7 705 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 ZNF614Q8N883 585 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 OR52P1PQ8NH57 321 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 LILRB4Q8NHJ6 448 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 NFKBIDQ8NI38 313 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 RP9Q8TA86 221 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 LRRC58Q96CX6 371 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 MRGPRX4Q96LA9 322 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 RNF145Q96MT1 663 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 SLC39A3Q9BRY0 314 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 FAM107BQ9H098 131 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 ACER3Q9NUN7 267 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 CLCF1Q9UBD9 225 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 Q9UFV3 132 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CORO2BQ9UQ03 480 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 RNF6Q9Y252 685 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 GPC6Q9Y625 555 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 PHF3Q92576 2039 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 TACC2O95359 2948 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 NAV2Q8IVL1 2488 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 MBD3L4A6NDZ8 208 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 MBD3L3A6NE82 208 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 MBD3L5A6NJ08 208 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 CLCA1A8K7I4 914 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 FAAHO00519 579 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 AP3D1O14617 1153 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 MRASO14807 208 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 TGM6O95932 706 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 COX4I1P13073 169 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ETS2P15036 469 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 SHC1P29353 583 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ACAA2P42765 397 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 ZNF41P51814 821 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 PCBP3P57721 371 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 RBBP4Q09028 425 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 FOXF1Q12946 379 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 CBFBQ13951 182 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 CYLC2Q14093 348 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 ZSWIM7Q19AV6 140 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 CTU2Q2VPK5 515 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 MRPL2Q5T653 305 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 REEP3Q6NUK4 255 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ZNF836Q6ZNA1 936 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 MAMDC2Q7Z304 686 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 SERPINA11Q86U17 422 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 COMTD1Q86VU5 262 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 LACC1Q8IV20 430 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 POU5F2Q8N7G0 328 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 C9orf106Q8NAJ2 232 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 NAXEQ8NCW5 288 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 TNIP2Q8NFZ5 429 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 OR8J3Q8NGG0 315 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 MBD3L2Q8NHZ7 208 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 FBXO27Q8NI29 283 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 BBS10Q8TAM1 723 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 WDR60Q8WVS4 1066 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ST8SIA1Q92185 356 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 RND1Q92730 232 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 GPATCH1Q9BRR8 931 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 RLIMQ9NVW2 624 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 PRDM4Q9UKN5 801 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 ZNF443Q9Y2A4 671 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 KLF2Q9Y5W3 355 aaPredicted RBP8.68□□□□□ -1.02
SRP54-210ENST00000556380 CACNA1CQ13936 2221 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 PKDREJQ9NTG1 2253 aa8.68□□□□□ -1.02
SRP54-210ENST00000556380 A0A0J9YW62 118 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 A1L4Q6 167 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 FAM47E-STBD1D6RA91 191 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 H0Y3Z8 333 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 H3BML4 177 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 SHOX2O60902 331 aaPredicted RBP8.67□□□□□ -1.02
SRP54-210ENST00000556380 CYP7B1O75881 506 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 RCBTB2O95199 551 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 CLDN14O95500 239 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 NUDT14O95848 222 aa8.67□□□□□ -1.02
SRP54-210ENST00000556380 OPN1LWP04000 364 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms