RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 SYT5O00445 386 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 ADAM11O75078 769 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 TNFSF13O75888 250 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 HNRNPCL4P0DMR1 293 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 FCGR2AP12318 317 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 CARD18P57730 90 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 EEF1A1P68104 462 aaKnown RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 MERTKQ12866 999 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 NFYCQ13952 458 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 EEF1A1P5Q5VTE0 462 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 PLEKHM3Q6ZWE6 761 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 DMRTC2Q8IXT2 367 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 DPP10Q8N608 796 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 BBS10Q8TAM1 723 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 OSTF1Q92882 214 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 LRRC46Q96FV0 321 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 TRIM8Q9BZR9 551 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 RNF122Q9H9V4 155 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 BCL2L10Q9HD36 194 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 SAR1AQ9NR31 198 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 MRGBPQ9NV56 204 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 RLIMQ9NVW2 624 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 JKAMPQ9P055 326 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 MCTS1Q9ULC4 181 aaKnown RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 CACNA1CQ13936 2221 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 AP3D1O14617 1153 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 SYNGR4O95473 234 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 CRHP06850 196 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 THBS1P07996 1170 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 ARAFP10398 606 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 GPX2P18283 190 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 IDH2P48735 452 aaKnown RBP13.62□□□□□ -0.23
ACTN1-217ENST00000556203 DLX5P56178 289 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 SIRPAP78324 504 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 KLF10Q13118 480 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 SNTB1Q13884 538 aaKnown RBP13.62□□□□□ -0.23
ACTN1-217ENST00000556203 LARS2Q15031 903 aaKnown RBP13.62□□□□□ -0.23
ACTN1-217ENST00000556203 FBXL19-AS1Q494R0 122 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 PRAMEF8Q5VWM4 474 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 PRAMEF7Q5VXH5 474 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 C3orf33Q6P1S2 294 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 NFKBIDQ8NI38 313 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 RNASE6Q93091 150 aaKnown RBP13.62□□□□□ -0.23
ACTN1-217ENST00000556203 ANKRD27Q96NW4 1050 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 CGREF1Q99674 301 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 SRXN1Q9BYN0 137 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 PIGMQ9H3S5 423 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 COQ10BQ9H8M1 238 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 SERINC1Q9NRX5 453 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 PACSIN3Q9UKS6 424 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
ACTN1-217ENST00000556203 UTP20O75691 2785 aaKnown RBP13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CDHR4A6H8M9 788 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 FBP2O00757 339 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 PGM3O95394 542 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 SLC7A1P30825 629 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 KIR2DL2P43627 348 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CPA2P48052 419 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 MTPNP58546 118 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CDK6Q00534 326 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 EPS8Q12929 822 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CAPRIN1Q14444 709 aaKnown RBP13.61□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 VWA1Q6PCB0 445 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 GRINAQ7Z429 371 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 GDF7Q7Z4P5 450 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF440Q8IYI8 595 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF295-AS1Q8N0V1 137 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CLIP4Q8N3C7 705 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 STARD4Q96DR4 205 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 TIGARQ9NQ88 270 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 CTPS2Q9NRF8 586 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 FOXD3Q9UJU5 478 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF232Q9UNY5 417 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
ACTN1-217ENST00000556203 A0A1W2PNR3 127 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
ACTN1-217ENST00000556203 PLGP00747 810 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-217ENST00000556203 PABPC4LP0CB38 370 aaKnown RBP13.6□□□□□ -0.23
ACTN1-217ENST00000556203 GKN3PP0CG01 181 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 UQCRBP14927 111 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 APOBEC1P41238 236 aaKnown RBP13.6□□□□□ -0.23
ACTN1-217ENST00000556203 SCARB2Q14108 478 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 SELPLGQ14242 412 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 GUSBP1Q15486 140 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 MAPRE2Q15555 327 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 ZNF239Q16600 458 aaKnown RBP13.6□□□□□ -0.23
ACTN1-217ENST00000556203 RNF220Q5VTB9 566 aa13.6□□□□□ -0.23
ACTN1-217ENST00000556203 REEP3Q6NUK4 255 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms