RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 PTAFRP25105 342 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 RPL3P39023 403 aaKnown RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 CCT3P49368 545 aaKnown RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 CCR4P51679 360 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 RPL38P63173 70 aaKnown RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 CBFBQ13951 182 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 DCST2Q5T1A1 773 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF433Q8N7K0 673 aaPredicted RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 NOA1Q8NC60 698 aaKnown RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF300Q96RE9 604 aaPredicted RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 OXSMQ9NWU1 459 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 NPAP1Q9NZP6 1156 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 EMC3Q9P0I2 261 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 PTGDR2Q9Y5Y4 395 aa17.14■□□□□ 0.33
FOXN3-211ENST00000555855 YLPM1P49750 1951 aaKnown RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.33
FOXN3-211ENST00000555855 PLCE1Q9P212 2302 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 A0A096LNT2 108 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 GOLGA8QA0A0J9YX86 632 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 GOLGA8OA6NCC3 632 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 GOLGA8NF8WBI6 632 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 SMAD9O15198 467 aaKnown RBP17.13■□□□□ 0.33
FOXN3-211ENST00000555855 PROCP04070 461 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 LINC00032P0C843 101 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 CPA3P15088 417 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 COX5AP20674 150 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 HPCAL1P37235 193 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF83P51522 516 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 CSNK2A1P68400 391 aaPredicted RBP17.13■□□□□ 0.33
FOXN3-211ENST00000555855 CHRNEQ04844 493 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 TP53BP2Q13625 1128 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 QPRTQ15274 297 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 LSM12Q3MHD2 195 aaKnown RBP17.13■□□□□ 0.33
FOXN3-211ENST00000555855 SPDYE7PQ495Y7 208 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 GALNTL6Q49A17 601 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 TIGD2Q4W5G0 525 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 FBXW9Q5XUX1 488 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 C3orf33Q6P1S2 294 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 OR2T11Q8NH01 316 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 OR52N5Q8NH56 324 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 PROX1Q92786 737 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 ANKZF1Q9H8Y5 726 aa17.13■□□□□ 0.33
FOXN3-211ENST00000555855 SIRT3Q9NTG7 399 aaPredicted RBP17.13■□□□□ 0.33
FOXN3-211ENST00000555855 A0A1W2PPM1 405 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 TMEM114B3SHH9 223 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 SULT2B1O00204 365 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 RAD51DO75771 328 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 CYP7B1O75881 506 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 UBL4AP11441 157 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 BCKDHAP12694 445 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 THBS2P35442 1172 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 CHRNB3Q05901 458 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 NDUFAF6Q330K2 333 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
FOXN3-211ENST00000555855 C11orf71Q6IPW1 123 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 TMPPEQ6ZT21 453 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 NATD1Q8N6N6 113 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 OR5P2Q8WZ92 322 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF75CPQ92670 426 aaPredicted RBP17.12■□□□□ 0.33
FOXN3-211ENST00000555855 THUMPD3Q9BV44 507 aaKnown RBP17.12■□□□□ 0.33
FOXN3-211ENST00000555855 ATP6V1HQ9UI12 483 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 NOSIPQ9Y314 301 aaKnown RBP17.12■□□□□ 0.33
FOXN3-211ENST00000555855 PMF1-BGLAPU3KQ54 211 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 NBEAL1Q6ZS30 2694 aa17.12■□□□□ 0.33
FOXN3-211ENST00000555855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.12■□□□□ 0.33
FOXN3-211ENST00000555855 HAX1O00165 279 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 LMX1BO60663 402 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 PLIN3O60664 434 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 CSF3P09919 207 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 EDNRAP25101 427 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 CD40P25942 277 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 MAPK1P28482 360 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 DIO1P49895 249 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 KRTAP24-1Q3LI83 254 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 LIPMQ5VYY2 423 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF544Q6NX49 715 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
FOXN3-211ENST00000555855 ZNF525Q8N782 197 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 TMEM234Q8WY98 164 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 ST8SIA1Q92185 356 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 HTRA1Q92743 480 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 APH1AQ96BI3 265 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 ZHX1-C8orf76Q96EF9 292 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 LAT2Q9GZY6 243 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 ATAD3AQ9NVI7 634 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 KCNE3Q9Y6H6 103 aa17.11■□□□□ 0.33
FOXN3-211ENST00000555855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
FOXN3-211ENST00000555855 SERINC4A6NH21 518 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 H7C417 338 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 M0R1B8 84 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 ETV2O00321 342 aaPredicted RBP17.1■□□□□ 0.33
FOXN3-211ENST00000555855 LSM1O15116 133 aaKnown RBP17.1■□□□□ 0.33
FOXN3-211ENST00000555855 H6PDO95479 791 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 IGHV3-9P01782 118 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 TFPIP10646 304 aa17.1■□□□□ 0.33
FOXN3-211ENST00000555855 USF1P22415 310 aaPredicted RBP17.1■□□□□ 0.33
FOXN3-211ENST00000555855 CRHR1P34998 444 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms