RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	B3GNT2	Q9NY97	397 aa		3.31	□□□□□ -1.88
KTN1-222	ENST00000555506	ANGPTL2	Q9UKU9	493 aa		3.31	□□□□□ -1.88
KTN1-222	ENST00000555506	FAM240B	A0A1B0GVZ2	78 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	DHRS7C	A6NNS2	312 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506		E7ESA3	106 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506		F5H6K3	240 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	SULT2B1	O00204	365 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	PGK1	P00558	417 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	STS	P08842	583 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	FAS	P25445	335 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	GDF1	P27539	372 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	HSPA2	P54652	639 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	OC90	Q02509	493 aa	Predicted RBP	3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	KLRC3	Q07444	240 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	DPYSL2	Q16555	572 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	ATAD3C	Q5T2N8	411 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	PDZK1	Q5T2W1	519 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	CADM2	Q8N3J6	435 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	MFSD9	Q8NBP5	474 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	TCTEX1D2	Q8WW35	142 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	MRPS31	Q92665	395 aa	Known RBP	3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	NT5C3B	Q969T7	300 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	EFHD2	Q96C19	240 aa	Predicted RBP	3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	MS4A14	Q96JA4	679 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	RBM14	Q96PK6	669 aa	Known RBP	3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	NPY6R	Q99463	290 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	ZNF670	Q9BS34	389 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	WARS2	Q9UGM6	360 aa	Known RBP	3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	ERVW-1	Q9UQF0	538 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	NAALAD2	Q9Y3Q0	740 aa		3.3	□□□□□ -1.88
KTN1-222	ENST00000555506	NOTCH3	Q9UM47	2321 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	KANK1	Q14678	1352 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506		A0A1W2PQ72	361 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SNTN	A6NMZ2	147 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	NBR2	O15453	112 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	BCL2L11	O43521	198 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	CXCL13	O43927	109 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	FGF9	P31371	208 aa	Predicted RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	YWHAB	P31946	246 aa	Known RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MDH2	P40926	338 aa	Known RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MAGEA8	P43361	318 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	RPL23A	P62750	156 aa	Known RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	TRIM16L	Q309B1	348 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SBK1	Q52WX2	424 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	PHYHD1	Q5SRE7	291 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	CCDC183	Q5T5S1	534 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	VIT	Q6UXI7	678 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MYPOP	Q86VE0	399 aa	Predicted RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MARCH9	Q86YJ5	346 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SLC35F2	Q8IXU6	374 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SLC39A11	Q8N1S5	342 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	GPR137C	Q8N3F9	429 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	ATP6V0D2	Q8N8Y2	350 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	CATSPER1	Q8NEC5	780 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	OR2A12	Q8NGT7	310 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	TYMSOS	Q8TAI1	123 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MAIP1	Q8WWC4	291 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	FBXO32	Q969P5	355 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	NOL4L	Q96MY1	436 aa	Predicted RBP	3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	IL4I1	Q96RQ9	567 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	VCPKMT	Q9H867	229 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	POPDC2	Q9HBU9	364 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SGK2	Q9HBY8	427 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	MCCC2	Q9HCC0	563 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	DCAF16	Q9NXF7	216 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	OR1A1	Q9P1Q5	309 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	PHF11	Q9UIL8	331 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	ADAM28	Q9UKQ2	775 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	PDE10A	Q9Y233	779 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	PIGL	Q9Y2B2	252 aa		3.29	□□□□□ -1.88
KTN1-222	ENST00000555506	SMIM28	A0A1B0GU29	152 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506		A0A1B0GWB2	263 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506		H0Y8G0	127 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	POLR2D	O15514	142 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	PRKAB2	O43741	272 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	TIMM8A	O60220	97 aa	Predicted RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	OR10H3	O60404	316 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	ZNF254	O75437	659 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	GNA14	O95837	355 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	THY1	P04216	161 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	NCK1	P16333	377 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	POLR2E	P19388	210 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	GCA	P28676	217 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	EPHX2	P34913	555 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	GCK	P35557	465 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	RPL13A	P40429	203 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	KIR2DS2	P43631	304 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	TAF6	P49848	677 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	DAP3	P51398	398 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	HNRNPA3	P51991	378 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	SLC10A7	Q0GE19	358 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	PRR4	Q16378	134 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	GSG1	Q2KHT4	349 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	MARC1	Q5VT66	337 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	ATL3	Q6DD88	541 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	CCDC137	Q6PK04	289 aa	Known RBP	3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	CXCL17	Q6UXB2	119 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	PAMR1	Q6UXH9	720 aa		3.28	□□□□□ -1.88
KTN1-222	ENST00000555506	NBPF5P	Q86XG9	351 aa	Predicted RBP	3.28	□□□□□ -1.88

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