RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 LRGUKQ96M69 825 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 TMEM27Q9HBJ8 222 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 SLC7A8Q9UHI5 535 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 SPENQ96T58 3664 aaKnown RBP12.93□□□□□ -0.34
CHD8-208ENST00000555301 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 ACOT8O14734 319 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 WISP2O76076 250 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 NTN1O95631 604 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 IFNW1P05000 195 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 ATP6V1B2P21281 511 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 PTGS2P35354 604 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 APOBEC1P41238 236 aaKnown RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 ATRXP46100 2492 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 HOXC5Q00444 222 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 HSF1Q00613 529 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 MERTKQ12866 999 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 BCL2A1Q16548 175 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.34
CHD8-208ENST00000555301 VASNQ6EMK4 673 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 CYP2R1Q6VVX0 501 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 PLEKHM3Q6ZWE6 761 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 VTCN1Q7Z7D3 282 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 CADM2Q8N3J6 435 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 OR10Q1Q8NGQ4 319 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 VANGL1Q8TAA9 524 aaPredicted RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 POC1BQ8TC44 478 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 PYURFQ96I23 114 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 MCHR1Q99705 422 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 POLR2J2Q9GZM3 115 aaKnown RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 SERINC1Q9NRX5 453 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 RPS6KB2Q9UBS0 482 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 RALYQ9UKM9 306 aaKnown RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 POMPQ9Y244 141 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 SLC6A5Q9Y345 797 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 SPIN1Q9Y657 262 aaPredicted RBP12.92□□□□□ -0.34
CHD8-208ENST00000555301 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
CHD8-208ENST00000555301 AQP12BA6NM10 295 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 BCKDKO14874 412 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 TPST2O60704 377 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 PRKD3O94806 890 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 PEPDP12955 493 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 BMP7P18075 431 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 TNFRSF1BP20333 461 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 PSMA4P25789 261 aaKnown RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 FKBP2P26885 142 aaKnown RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 TACR3P29371 465 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 IFNA8P32881 189 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 OR1E2P47887 323 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 POLR2HP52434 150 aaKnown RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 MAP2K6P52564 334 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 RAC1P63000 192 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 FOXK1P85037 733 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 CRYZQ08257 329 aaKnown RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 SELENBP1Q13228 472 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 FLOT2Q14254 428 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 NPTX1Q15818 432 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 RBM45Q8IUH3 476 aaKnown RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 LACC1Q8IV20 430 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 AQP12AQ8IXF9 295 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 PM20D2Q8IYS1 436 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 OR4D11Q8NGI4 311 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 OR5M1Q8NGP8 315 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 DNAJA4Q8WW22 397 aaPredicted RBP12.91□□□□□ -0.34
CHD8-208ENST00000555301 MIB2Q96AX9 1013 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 ZNF524Q96C55 264 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 TIMP4Q99727 224 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 WFDC6Q9BQY6 131 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 UGT2B28Q9BY64 529 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 C12orf10Q9HB07 376 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 SELENONQ9NZV5 590 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 SPRR3Q9UBC9 169 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 ACAD8Q9UKU7 415 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 ZNF337Q9Y3M9 751 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 SPTA1P02549 2419 aa12.91□□□□□ -0.34
CHD8-208ENST00000555301 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
CHD8-208ENST00000555301 GJE1A6NN92 205 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 NPIPA2E9PIF3 369 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 NPIPA3F8WFD2 350 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 H3BML4 177 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 CIB2O75838 187 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 ABOP16442 354 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 HTR2AP28223 471 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 ENTPD8Q5MY95 495 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.34
CHD8-208ENST00000555301 WLSQ5T9L3 541 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 ULK3Q6PHR2 472 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 DEF8Q6ZN54 512 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 ATCAYQ86WG3 371 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
CHD8-208ENST00000555301 GALNT11Q8NCW6 608 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms