RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 BMP4P12644 408 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 COX5AP20674 150 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 PTAFRP25105 342 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 RNF144AP50876 292 aaPredicted RBP13.69□□□□□ -0.22
NEDD1-207ENST00000555114 RAB35Q15286 201 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
NEDD1-207ENST00000555114 C6orf52Q5T4I8 152 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 FBXL14Q8N1E6 418 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 UBE2J2Q8N2K1 259 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 SFXN5Q8TD22 340 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 SLC25A43Q8WUT9 341 aaPredicted RBP13.69□□□□□ -0.22
NEDD1-207ENST00000555114 TWIST2Q8WVJ9 160 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 ST8SIA1Q92185 356 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 ZHX1-C8orf76Q96EF9 292 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 CACNG6Q9BXT2 260 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 EML4Q9HC35 981 aaKnown RBP13.69□□□□□ -0.22
NEDD1-207ENST00000555114 CBLN4Q9NTU7 201 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 LPAR3Q9UBY5 353 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 DNAJC15Q9Y5T4 150 aa13.69□□□□□ -0.22
NEDD1-207ENST00000555114 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
NEDD1-207ENST00000555114 CR1P17927 2039 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 CIB4A0PJX0 185 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 DUXAA6NLW8 204 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 ETV2O00321 342 aaPredicted RBP13.68□□□□□ -0.22
NEDD1-207ENST00000555114 SMAD9O15198 467 aaKnown RBP13.68□□□□□ -0.22
NEDD1-207ENST00000555114 CFLARO15519 480 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 TRIM13O60858 407 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 PGM3O95394 542 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 DHRS4L1P0CG22 281 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 SLC25A16P16260 332 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 IGHV1-2P23083 117 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 TTKP33981 857 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 NDUFAF6Q330K2 333 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 SLC22A25Q6T423 547 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 C10orf107Q8IVU9 208 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 OR7A2PQ8NGA2 310 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 ZNF300Q96RE9 604 aaPredicted RBP13.68□□□□□ -0.22
NEDD1-207ENST00000555114 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 DHRS9Q9BPW9 319 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 NMUR2Q9GZQ4 415 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 LAT2Q9GZY6 243 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 ANKZF1Q9H8Y5 726 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 GPATCH2Q9NW75 528 aa13.68□□□□□ -0.22
NEDD1-207ENST00000555114 ING1Q9UK53 422 aaPredicted RBP13.68□□□□□ -0.22
NEDD1-207ENST00000555114 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 GOLGA8QA0A0J9YX86 632 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 GOLGA8OA6NCC3 632 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 SERINC4A6NH21 518 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 C9JVG2 144 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 NPIPB9F8W1W9 429 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 GOLGA8NF8WBI6 632 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 SULT2B1O00204 365 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 RAD51DO75771 328 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 CYP7B1O75881 506 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 C6orf47O95873 294 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 FGF4P08620 206 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 LAMP1P11279 417 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 KRT4P19013 534 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 PGCP20142 388 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 SOAT1P35610 550 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 DIO1P49895 249 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 MERTKQ12866 999 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 PDK3Q15120 406 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 TMEM249Q2WGJ8 235 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 ATP6AP1LQ52LC2 224 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 PDZK1Q5T2W1 519 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 FBXW9Q5XUX1 488 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 TMPPEQ6ZT21 453 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 MUC15Q8N387 334 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 ZNF433Q8N7K0 673 aaPredicted RBP13.67□□□□□ -0.22
NEDD1-207ENST00000555114 OR10H5Q8NGA6 315 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 APH1AQ96BI3 265 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 ZNF775Q96BV0 537 aaPredicted RBP13.67□□□□□ -0.22
NEDD1-207ENST00000555114 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 THUMPD3Q9BV44 507 aaKnown RBP13.67□□□□□ -0.22
NEDD1-207ENST00000555114 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
NEDD1-207ENST00000555114 BEX2Q9BXY8 128 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 AMBRA1Q9C0C7 1298 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 NOSIPQ9Y314 301 aaKnown RBP13.67□□□□□ -0.22
NEDD1-207ENST00000555114 TRAF6Q9Y4K3 522 aa13.67□□□□□ -0.22
NEDD1-207ENST00000555114 FREM1Q5H8C1 2179 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 CADP27708 2225 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 GPR171O14626 319 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 PIP5K1BO14986 540 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 PHF1O43189 567 aaPredicted RBP13.66□□□□□ -0.22
NEDD1-207ENST00000555114 STX11O75558 287 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 H6PDO95479 791 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 CSF3P09919 207 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 TFPIP10646 304 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
NEDD1-207ENST00000555114 FABP6P51161 128 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 CASP9P55211 416 aa13.66□□□□□ -0.22
NEDD1-207ENST00000555114 IRX1P78414 480 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms