RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 DPYSL3Q14195 570 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 RIPPLY2Q5TAB7 128 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 SLC25A24Q6NUK1 477 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 OR5AU1Q8NGC0 362 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 OR2T34Q8NGX1 318 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 OSTF1Q92882 214 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 EXOSC3Q9NQT5 275 aaKnown RBP3.86□□□□□ -1.79
CHD8-207ENST00000554384 ABCD2Q9UBJ2 740 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 ATP6V0A2Q9Y487 856 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 ITGB4P16144 1822 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 ZNF609O15014 1411 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 RGPD2P0DJD1 1756 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 IGHV3-35A0A0C4DH35 117 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 B3GAT3O94766 335 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 UFL1O94874 794 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 DUSP14O95147 198 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 CSF2P04141 144 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 IGF1P05019 195 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 PCCBP05166 539 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 MDH2P40926 338 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 ZNF154Q13106 437 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 SNTB2Q13425 540 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 SERTAD2Q14140 314 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 TGIF1Q15583 401 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 CYP51A1Q16850 503 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 CCDC57Q2TAC2 916 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 PAN3Q58A45 887 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 CELF3Q5SZQ8 465 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 MARC1Q5VT66 337 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 SPINK14Q6IE38 97 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 LRRC8BQ6P9F7 803 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 CES3Q6UWW8 571 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 DPY19L4Q7Z388 723 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 KIAA1328Q86T90 577 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 TEX9Q8N6V9 391 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 CSNK1A1LQ8N752 337 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 RPL3LQ92901 407 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 RAB7BQ96AH8 199 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 VSIG2Q96IQ7 327 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 OPN3Q9H1Y3 402 aaPredicted RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 ANAPC7Q9UJX3 599 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 GMPPBQ9Y5P6 360 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 AFDNP55196 1824 aaKnown RBP3.85□□□□□ -1.79
CHD8-207ENST00000554384 MRC1P22897 1456 aa3.85□□□□□ -1.79
CHD8-207ENST00000554384 A0A1B0GWJ7 208 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 FCN1O00602 326 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 CDX4O14627 284 aaPredicted RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 MAPK13O15264 365 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 GPAA1O43292 621 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 OR1F1O43749 312 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 SRSF10O75494 262 aaKnown RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 SCRG1O75711 98 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 F10P00742 488 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 CLUP10909 449 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 RPL34P49207 117 aaKnown RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 EMDP50402 254 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 SLC25A1P53007 311 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 RGS1Q08116 209 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 PJVKQ0ZLH3 352 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 ASAH1Q13510 395 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 MEDAGQ5VYS4 303 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 SCYL2Q6P3W7 929 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 VITQ6UXI7 678 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 NBPF5PQ86XG9 351 aaPredicted RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 MARCH9Q86YJ5 346 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 OR10T2Q8NGX3 314 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 AKR1E2Q96JD6 320 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 NOL4LQ96MY1 436 aaPredicted RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 TPPP3Q9BW30 176 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 SMC3Q9UQE7 1217 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 RNF6Q9Y252 685 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 EIF3LQ9Y262 564 aaKnown RBP3.84□□□□□ -1.79
CHD8-207ENST00000554384 L3MBTL1Q9Y468 752 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 USP16Q9Y5T5 823 aa3.84□□□□□ -1.79
CHD8-207ENST00000554384 SF3B1O75533 1304 aaKnown RBP eCLIP3.84□□□□□ -1.79
CHD8-207ENST00000554384 NRXN2Q9P2S2 1712 aa3.84□□□□□ -1.8
CHD8-207ENST00000554384 BCORQ6W2J9 1755 aa3.84□□□□□ -1.8
CHD8-207ENST00000554384 AKAP11Q9UKA4 1901 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 PKD1L2Q7Z442 2459 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 RAMP1O60894 148 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 ANP32DO95626 131 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 ATP6V1C1P21283 382 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 IGHV1-2P23083 117 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 KIF5BP33176 963 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 CA8P35219 290 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 GNPDA1P46926 289 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 FNTAP49354 379 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 NTHL1P78549 312 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 EWSR1Q01844 656 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD8-207ENST00000554384 KCNJ11Q14654 390 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 GSG1Q2KHT4 349 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 QRICH1Q2TAL8 776 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 TMEM31Q5JXX7 168 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 BLOC1S2Q6QNY1 142 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 PAMR1Q6UXH9 720 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 C9orf40Q8IXQ3 194 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms