RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMEM185BQ9H7F4 350 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TUBA4BQ9H853 241 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TMEM138Q9NPI0 162 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MEPEQ9NQ76 525 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 GPATCH2Q9NW75 528 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ZNF70Q9UC06 446 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 hCG_1809904A0A1W2PP81 198 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 A0A1W2PPC1 479 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 A0A1W2PPH5 198 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 A0A1W2PR64 198 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 A0A1W2PRV1 198 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 FAM86C2PA6NEL3 165 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 IDSB3KWA1 339 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 CHST10O43529 356 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 OR10H2O60403 315 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PDYNP01213 254 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 RPS2P15880 293 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 PPIBP23284 216 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 PRPH2P23942 346 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ELAVL4P26378 380 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 ADH6P28332 368 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MSX1P28360 303 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 GABRR2P28476 465 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 S100A2P29034 98 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MTNR1AP48039 350 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 LIM2P55344 173 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SLC26A5P58743 744 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 CD81P60033 236 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 HTRA4P83105 476 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 BIKQ13323 160 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 RSU1Q15404 277 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PTPRNQ16849 979 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MST1LQ2TV78 715 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ZNF791Q3KP31 576 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 CTSL3PQ5NE16 218 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 FAM27D1Q5T7N8 215 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 NSUN5P2Q63ZY6 315 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 IL34Q6ZMJ4 242 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ABHD13Q7L211 337 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ZNF546Q86UE3 836 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 C1QL4Q86Z23 238 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 HORMAD2Q8N7B1 307 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 OR51S1Q8NGJ8 323 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 OR56A3Q8NH54 315 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TFGQ92734 400 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 C3orf49Q96BT1 292 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MED8Q96G25 268 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 CDKN2AIPNLQ96HQ2 116 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 LRFN5Q96NI6 719 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ORAI3Q9BRQ5 295 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TKTL2Q9H0I9 626 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 POLR2J3Q9H1A7 115 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 TMEM27Q9HBJ8 222 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 GAR1Q9NY12 217 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 PTGFRNQ9P2B2 879 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ZDHHC8Q9ULC8 765 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 CORO2BQ9UQ03 480 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 MOKQ9UQ07 419 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 KCNIP3Q9Y2W7 256 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PCDHB1Q9Y5F3 818 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 RLFQ13129 1914 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 GOLGB1Q14789 3259 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 YLPM1P49750 1951 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 UBE2QL1A1L167 161 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 LOC730098B7Z3J9 87 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 MAN2B1O00754 1011 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 SCAMP2O15127 329 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 FFAR2O15552 330 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 FMO6PO60774 539 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 CLDN11O75508 207 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 KLHL18O94889 574 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 OR2F2O95006 317 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 PMP2P02689 132 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 PKMP14618 531 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 MYOGP15173 224 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 AGTR1P30556 359 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 GLP1RP43220 463 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 KIR3DL2P43630 455 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 AP3S2P59780 193 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 UBE2MP61081 183 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 MAXP61244 160 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 SRSF11Q05519 484 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 PJVKQ0ZLH3 352 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 OR2F1Q13607 317 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 TTLL4Q14679 1199 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 USF2Q15853 346 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 AMHR2Q16671 573 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NDUFAF6Q330K2 333 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NKAPLQ5M9Q1 402 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 CXorf57Q6NSI4 855 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 PRSS55Q6UWB4 352 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 SLC36A4Q6YBV0 504 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 MON1AQ86VX9 555 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 IZUMO1Q8IYV9 350 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 POGLUT1Q8NBL1 392 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 UBAC2Q8NBM4 344 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 DNAAF1Q8NEP3 725 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms