RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MARCH1Q8TCQ1 289 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 FCGR1BQ92637 280 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SYAP1Q96A49 352 aaPredicted RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 TBC1D31Q96DN5 1066 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 SLC17A9Q9BYT1 436 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ECT2Q9H8V3 914 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ROPN1Q9HAT0 212 aaPredicted RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 PATZ1Q9HBE1 687 aaKnown RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 RDH8Q9NYR8 311 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 CGNQ9P2M7 1197 aaKnown RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 EPS15L1Q9UBC2 864 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ZMAT5Q9UDW3 170 aaKnown RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 FETUBQ9UGM5 382 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ANGPTL2Q9UKU9 493 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 PRPF19Q9UMS4 504 aaKnown RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 RRP15Q9Y3B9 282 aaKnown RBP1.97□□□□□ -2.09
VRK1-202ENST00000553683 N6AMT1Q9Y5N5 214 aa1.97□□□□□ -2.09
VRK1-202ENST00000553683 ABCC4O15439 1325 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RNF103-CHMP3A0A140T963 221 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ANKRD30BLA7E2S9 258 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 FAM166BA8MTA8 275 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 F8VZ95 297 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RASGRF2O14827 1237 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 HCN1O60741 890 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 INSP01308 110 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ADRB3P13945 408 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ETS1P14921 441 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 DNAJB1P25685 340 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 KIF5BP33176 963 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 DLSTP36957 453 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 HSD17B7P56937 341 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 CCDC173Q0VFZ6 552 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RAB40BQ12829 278 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ARFRP1Q13795 201 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 PDK1Q15118 436 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 NSDHLQ15738 373 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ZNF311Q5JNZ3 666 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 TOR1AIP1Q5JTV8 583 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RBM43Q6ZSC3 357 aaKnown RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 APTXQ7Z2E3 356 aaKnown RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 SYVN1Q86TM6 617 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 LINC01551Q86U37 167 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ZNF429Q86V71 674 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 MYOCDQ8IZQ8 938 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 NKAPP1Q8N9T2 125 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 MNS1Q8NEH6 495 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 OR52I1Q8NGK6 324 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 C17orf50Q8WW18 174 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ZNF75CPQ92670 426 aaPredicted RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 N4BP2L2Q92802 583 aaPredicted RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 CELF6Q96J87 481 aaKnown RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 GSDMAQ96QA5 445 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 FICDQ9BVA6 458 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 SCRT1Q9BWW7 348 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 CRNKL1Q9BZJ0 848 aaKnown RBP1.96□□□□□ -2.1
VRK1-202ENST00000553683 SLC7A5P2Q9GIP4 190 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RAB17Q9H0T7 212 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 SMYD3Q9H7B4 428 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 MED4Q9NPJ6 270 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 AGPAT5Q9NUQ2 364 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 NUDT15Q9NV35 164 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ATXN10Q9UBB4 475 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 SPASTQ9UBP0 616 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 PCSK1NQ9UHG2 260 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 MOSPD1Q9UJG1 213 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ANAPC7Q9UJX3 599 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 NUDCQ9Y266 331 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 OARD1Q9Y530 152 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 RB1CC1Q8TDY2 1594 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 TMEM94Q12767 1356 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 PIK3R4Q99570 1358 aa1.96□□□□□ -2.1
VRK1-202ENST00000553683 ARAP1Q96P48 1450 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 MED1Q15648 1581 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 A0A1W2PNV4 684 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 FAM74A7A6NL05 159 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 TCP11X1B4DZS4 312 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 KRTAP4-16G5E9R7 235 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 CPLX1O14810 134 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 TRAF3IP2O43734 574 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 ZNF780AO75290 641 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 SLITRK3O94933 977 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 TSPY4P0CV99 314 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 TSPY10P0CW01 314 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 GZMAP12544 262 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 COX7A1P24310 79 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 PSMA2P25787 234 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 CCND2P30279 289 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 CYLC1P35663 651 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 CD86P42081 329 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 CSNK1G2P78368 415 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 SHHQ15465 462 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 RABL6Q3YEC7 729 aaPredicted RBP1.95□□□□□ -2.1
VRK1-202ENST00000553683 TIGITQ495A1 244 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 LINC01620Q4KN68 170 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 FAM74A3Q4VXF1 159 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 RABGAP1LQ5R372 815 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 C11orf71Q6IPW1 123 aa1.95□□□□□ -2.1
VRK1-202ENST00000553683 GALNT17Q6IS24 598 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms