RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MLF1P58340 268 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 COPZ1P61923 177 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 C17orf67Q0P5P2 114 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ST3GAL3Q11203 375 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 BPTFQ12830 3046 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 EPS8Q12929 822 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SNTA1Q13424 505 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 FGFBP1Q14512 234 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 MAPK11Q15759 364 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ATP6AP1Q15904 470 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 NRF1Q16656 503 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 KLHL26Q53HC5 615 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CCNJQ5T5M9 372 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 BROXQ5VW32 411 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TCTN3Q6NUS6 607 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 H3F3CQ6NXT2 135 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 NPSR1Q6W5P4 371 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZBTB49Q6ZSB9 765 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 WDR53Q7Z5U6 358 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 PPP1R32Q7Z5V6 425 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CARM1Q86X55 608 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 VRK2Q86Y07 508 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CDK20Q8IZL9 346 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 KLHL36Q8N4N3 616 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TMEM156Q8N614 296 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 PACRGLQ8N7B6 248 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF614Q8N883 585 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF321PQ8N8H1 164 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF441Q8N8Z8 693 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SMYD1Q8NB12 490 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF248Q8NDW4 579 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SIMC1Q8NDZ2 872 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ASB15Q8WXK1 588 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 LRTOMTQ8WZ04 291 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TMBIM1Q969X1 311 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 EME1Q96AY2 570 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TAMM41Q96BW9 452 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 OMA1Q96E52 524 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 RNF31Q96EP0 1072 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 THOC3Q96J01 351 aaKnown RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 C7orf34Q96L11 122 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SGCZQ96LD1 299 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 HS6ST2Q96MM7 605 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF300Q96RE9 604 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CCNL2Q96S94 520 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ADOQ96SZ5 270 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SECISBP2Q96T21 854 aaKnown RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 EPYCQ99645 322 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 MCHR1Q99705 422 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 WDR77Q9BQA1 342 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF559Q9BR84 538 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 FNDC11Q9BVV2 318 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TBL1XR1Q9BZK7 514 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TRIM2Q9C040 744 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 KLHL4Q9C0H6 718 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 LAT2Q9GZY6 243 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 LHPPQ9H008 270 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ANKRD19PQ9H560 264 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF160Q9HCG1 818 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 KRCC1Q9NPI7 259 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 AGPAT4Q9NRZ5 378 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 HPF1Q9NWY4 346 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 STMN3Q9NZ72 180 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 DSPPQ9NZW4 1301 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CNIH4Q9P003 139 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ENOPH1Q9UHY7 261 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ST6GALNAC2Q9UJ37 374 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ABCG2Q9UNQ0 655 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 POLHQ9Y253 713 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF443Q9Y2A4 671 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ORC6Q9Y5N6 252 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ENPP4Q9Y6X5 453 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 V9GYQ6 96 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 RIF1Q5UIP0 2472 aaKnown RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 PMS2P1A4D2B8 440 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 ALG1L2C9J202 215 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 G3V2T6 193 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 H3BNX3 289 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 TNFRSF11BO00300 401 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 RRP8O43159 456 aaKnown RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF264O43296 627 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 TPST1O60507 370 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 ITGA10O75578 1167 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 OR2J2O76002 312 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 PRSS23O95084 383 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 OXSR1O95747 527 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 SEMG1P04279 462 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 P04436 131 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 H1F0P07305 194 aaKnown RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 LINGO3P0C6S8 592 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 CYP4B1P13584 511 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 LIFP15018 202 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF23P17027 643 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 NAT1P18440 290 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 CDH2P19022 906 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 PGCP20142 388 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 FPR1P21462 350 aa4.58□□□□□ -1.68
VTI1B-202ENST00000553619 RPS4Y1P22090 263 aaKnown RBP4.58□□□□□ -1.68
VTI1B-202ENST00000553619 F8A1P23610 371 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms