RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 FAM120AOSQ5T036 256 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 MROH9Q5TGP6 573 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 AGAP6Q5VW22 663 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 CYB5R2Q6BCY4 276 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 KLC3Q6P597 504 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TMEM107Q6UX40 140 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 Q6ZT83 130 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 BHLHA15Q7RTS1 189 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TRABD2AQ86V40 505 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 MEX3DQ86XN8 651 aaKnown RBP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 C16orf78Q8WTQ4 265 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 APIPQ96GX9 242 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 ADAD1Q96M93 576 aaKnown RBP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 KLHL15Q96M94 604 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 ACPTQ9BZG2 426 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 PLA2G12AQ9BZM1 189 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 DPH5Q9H2P9 285 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 GIMAP4Q9NUV9 329 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 VPS29Q9UBQ0 182 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TMCO1Q9UM00 188 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SNX6Q9UNH7 406 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 A8MT66 165 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 MANBAO00462 879 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 LYZL6O75951 148 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 OR4F21O95013 312 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PGM3O95394 542 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 OTCP00480 354 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 JUNP05412 331 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 FESP07332 822 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 IFI6P09912 130 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CSF3P09919 207 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 LINGO3P0C6S8 592 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 COL6A2P12110 1019 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 TSPAN8P19075 237 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 DDCP20711 480 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 USF1P22415 310 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 ELK4P28324 431 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 MPIP34949 423 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 OR3A2P47893 321 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 RFX3P48380 749 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CLK3P49761 638 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 GZMKP49863 264 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 NCBP2P52298 156 aaKnown RBP eCLIP6.4□□□□□ -1.385e-7■■■■□ 25.1
ATXN3-219ENST00000553488 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 MANFP55145 182 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CDH13P55290 713 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 FOXF1Q12946 379 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CALCOCO2Q13137 446 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 SLC29A2Q14542 456 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 HEPACAMQ14CZ8 416 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 UBAP2Q5T6F2 1119 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CPTPQ5TA50 214 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 FAM166AQ6J272 317 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 ZDHHC24Q6UX98 284 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 Q6ZSR9 355 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 FCRLAQ7L513 359 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC25Q86WR0 208 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 MUC15Q8N387 334 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 GATSQ8NAP1 163 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 ACTRT2Q8TDY3 377 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PIK3R3Q92569 461 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PROX1Q92786 737 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 OSTF1Q92882 214 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CPNE4Q96A23 557 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 MSI2Q96DH6 328 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 DHRS9Q9BPW9 319 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PSD2Q9BQI7 771 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 ERP44Q9BS26 406 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 EBPLQ9BY08 206 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 GLIPR2Q9H4G4 154 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CXorf36Q9H7Y0 433 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 CHODLQ9H9P2 273 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 BCO1Q9HAY6 547 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 DDX18Q9NVP1 670 aaKnown RBP6.4□□□□□ -1.38
ATXN3-219ENST00000553488 PRSS50Q9UI38 385 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 KCNS2Q9ULS6 477 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 X6R8D5 127 aa6.4□□□□□ -1.38
ATXN3-219ENST00000553488 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 GNG14A0A1W2PPG7 69 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 KCNAB3O43448 404 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 RAD51CO43502 376 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 SPRY1O43609 319 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 LY6HO94772 140 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 NKX2-2O95096 273 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 YES1P07947 543 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 RBP1P09455 135 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 PABPC4LP0CB38 370 aaKnown RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 IGHV1-2P23083 117 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ME2P23368 584 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 TYK2P29597 1187 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 SFTPDP35247 375 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 MAGEA4P43358 317 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 GSTM5P46439 218 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 PRIM2P49643 509 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF41P51814 821 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms