RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 OR5M9Q8NGP3 310 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 OR10A6Q8NH74 314 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 NFKBIDQ8NI38 313 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 PROX1Q92786 737 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CCDC120Q96HB5 630 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 KLHL15Q96M94 604 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 DMRTA2Q96SC8 542 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF559Q9BR84 538 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 SFXN3Q9BWM7 321 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 PIGMQ9H3S5 423 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 TMEM27Q9HBJ8 222 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 KCNJ16Q9NPI9 418 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ADPRHL2Q9NX46 363 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 FLRT3Q9NZU0 649 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 SLAMF8Q9P0V8 285 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ARMCX1Q9P291 453 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 SPRR3Q9UBC9 169 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 TESQ9UGI8 421 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 TAGLN3Q9UI15 199 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC6A5Q9Y345 797 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 ELOVL7A1L3X0 281 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MBD3L4A6NDZ8 208 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MBD3L3A6NE82 208 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MBD3L5A6NJ08 208 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC22A20A6NK97 555 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 FAM220BPB1ANY3 271 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 H3BML4 177 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 FBP2O00757 339 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 OR2T1O43869 369 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 RCBTB2O95199 551 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 CLDN14O95500 239 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 STAMBPO95630 424 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 PRKCAP17252 672 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 CTSSP25774 331 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 RASSF2P50749 326 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 CARD18P57730 90 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 SESN3P58005 492 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MTPNP58546 118 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 RAC3P60763 192 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MXRA7P84157 204 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 FUT5Q11128 374 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 GTDC1Q4AE62 458 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 SAMD4BQ5PRF9 694 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 ARSKQ6UWY0 536 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 SSX8Q7RTT4 187 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 KIF18BQ86Y91 864 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 OR2V1Q8NHB1 315 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 LILRB4Q8NHJ6 448 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 MBD3L2Q8NHZ7 208 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 FBXO27Q8NI29 283 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 RCN3Q96D15 328 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 EPYCQ99645 322 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 DNAJB12Q9NXW2 375 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 SH3BGRL2Q9UJC5 107 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 TRAPPC4Q9Y296 219 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 LIPGQ9Y5X9 500 aa9.27□□□□□ -0.93
TRAFD1-208ENST00000552890 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 NPIPA5A0A0B4J1W7 369 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 NPIPA7E9PJI5 369 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 AP3D1O14617 1153 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 GPR171O14626 319 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 ADAM10O14672 748 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 ATP5HO75947 161 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 NTN1O95631 604 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 PLGP00747 810 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 NPIPA8P0DM63 369 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 GLI4P10075 376 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 CALB2P22676 271 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 CEACAM8P31997 349 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 RYKP34925 604 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 IDH2P48735 452 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 GYS2P54840 703 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 CLDN18P56856 261 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 PCBP3P57721 371 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 RGS8P57771 180 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 SRYQ05066 204 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 EPS8Q12929 822 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 ADRM1Q16186 407 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 MAPK14Q16539 360 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 EMC4Q5J8M3 183 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 HBMQ6B0K9 141 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 ULK3Q6PHR2 472 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 CBLN3Q6UW01 205 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 PLEKHM3Q6ZWE6 761 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 FGD2Q7Z6J4 655 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 ADGRE4PQ86SQ3 457 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 STK32CQ86UX6 486 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 CALHM3Q86XJ0 350 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 LSMEM1Q8N8F7 131 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 MAL2Q969L2 176 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 SDCCAG3Q96C92 435 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC47A1Q96FL8 570 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms