RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 TRIM46Q7Z4K8 759 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 MTERF4Q7Z6M4 381 aaKnown RBP16.3■□□□□ 0.2
RPAP3-207ENST00000551293 SLC22A9Q8IVM8 553 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 ANKS4BQ8N8V4 417 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 FAM120BQ96EK7 910 aaKnown RBP16.3■□□□□ 0.2
RPAP3-207ENST00000551293 MRGPRX4Q96LA9 322 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 PIMREGQ9BSJ6 248 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 REEP4Q9H6H4 257 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
RPAP3-207ENST00000551293 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
RPAP3-207ENST00000551293 ZNF180Q9UJW8 692 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 PMF1-BGLAPU3KQ54 211 aa16.3■□□□□ 0.2
RPAP3-207ENST00000551293 ATP6V1G2-DDX39BF2Z307 99 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 H3BNH8 94 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 PGRP06401 933 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 ITGA2P17301 1181 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 NTF4P34130 210 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 DIO1P49895 249 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 SQLEQ14534 574 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 CLEC6AQ6EIG7 209 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 ZNF544Q6NX49 715 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.29■□□□□ 0.2
RPAP3-207ENST00000551293 ZNF527Q8NB42 609 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 OR52E4Q8NGH9 312 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 APH1AQ96BI3 265 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 SORCS2Q96PQ0 1159 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 IQCGQ9H095 443 aaKnown RBP16.29■□□□□ 0.2
RPAP3-207ENST00000551293 NOSIPQ9Y314 301 aaKnown RBP16.29■□□□□ 0.2
RPAP3-207ENST00000551293 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 CCL27Q9Y4X3 112 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 ACTL7BQ9Y614 415 aa16.29■□□□□ 0.2
RPAP3-207ENST00000551293 MEGF8Q7Z7M0 2845 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 BMP4P12644 408 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 SDC1P18827 310 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 LCN1P31025 176 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 CASQ1P31415 396 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 SUMO3P55854 103 aaPredicted RBP16.28■□□□□ 0.2
RPAP3-207ENST00000551293 SLC25A3Q00325 362 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 MLC1Q15049 377 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 EXOSC6Q5RKV6 272 aaKnown RBP16.28■□□□□ 0.2
RPAP3-207ENST00000551293 DCST2Q5T1A1 773 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 OLIG3Q7RTU3 272 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 WDR31Q8NA23 367 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 OR5W2Q8NH69 310 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 IFT81Q8WYA0 676 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 TRMOQ9BU70 441 aa16.28■□□□□ 0.2
RPAP3-207ENST00000551293 THUMPD3Q9BV44 507 aaKnown RBP16.28■□□□□ 0.2
RPAP3-207ENST00000551293 SIRT3Q9NTG7 399 aaPredicted RBP16.28■□□□□ 0.2
RPAP3-207ENST00000551293 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 LRP5LA4QPB2 252 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 NPIPB8E9PQR5 432 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 SULT2B1O00204 365 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 TCF21O43680 179 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 TFPIP10646 304 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 GCAP28676 217 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 APOBEC3AP31941 199 aaPredicted RBP16.27■□□□□ 0.2
RPAP3-207ENST00000551293 TP53BP2Q13625 1128 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 GABRA6Q16445 453 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 MST1LQ2TV78 715 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 C12orf54Q6X4T0 127 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 TOR1AIP2Q8NFQ8 470 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 OR2T11Q8NH01 316 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 VRK1Q99986 396 aaPredicted RBP16.27■□□□□ 0.2
RPAP3-207ENST00000551293 PIGUQ9H490 435 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 ASB6Q9NWX5 421 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 C1orf109Q9NX04 203 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 EMC3Q9P0I2 261 aa16.27■□□□□ 0.2
RPAP3-207ENST00000551293 A0A087WUV0 522 aaPredicted RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ESPNB1AK53 854 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ZNF264O43296 627 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 SPRY1O43609 319 aaPredicted RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ITGA5P08648 1049 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 UBL4AP11441 157 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 CFPP27918 469 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 SRP14P37108 136 aaKnown RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 FRKP42685 505 aaPredicted RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ATP12AP54707 1039 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 RPL38P63173 70 aaKnown RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 PHC1P78364 1004 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 MERTKQ12866 999 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 CBFBQ13951 182 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 SLC25A53Q5H9E4 307 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 PDZK1Q5T2W1 519 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ABLIM2Q6H8Q1 611 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ZCCHC12Q6PEW1 402 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 SSX8Q7RTT4 187 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 RELL1Q8IUW5 271 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 CCDC103Q8IW40 242 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 C17orf53Q8N3J3 647 aaPredicted RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ADAMTS15Q8TE58 950 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 STACQ99469 402 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 HOXD1Q9GZZ0 328 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 FKRPQ9H9S5 495 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 DUSP22Q9NRW4 184 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 ACSS1Q9NUB1 689 aaPredicted RBP16.26■□□□□ 0.19
RPAP3-207ENST00000551293 TAS2R16Q9NYV7 291 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 MOKQ9UQ07 419 aa16.26■□□□□ 0.19
RPAP3-207ENST00000551293 DTNAQ9Y4J8 743 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms