RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 IDSB3KWA1 339 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 H7C417 338 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RFXAPO00287 272 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 YY2O15391 372 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TAPBPO15533 448 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 EMC8O43402 210 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC25A12O75746 678 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RPP40O75818 363 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 NCR1O76036 304 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TOXO94900 526 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 NDUFB6O95139 128 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C6orf47O95873 294 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OTCP00480 354 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 MELTFP08582 738 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CHRM5P08912 532 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GKN3PP0CG01 181 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 VSIG10L2P0DP72 767 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 HKR1P10072 659 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RAC2P15153 192 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C5AR1P21730 350 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 PPIBP23284 216 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DDTP30046 118 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 BDKRB2P30411 391 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 VIPR1P32241 457 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CSF2RBP32927 897 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CTNNB1P35222 781 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OPRD1P41143 372 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ECI1P42126 302 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 KIR3DL2P43630 455 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CDX1P47902 265 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 STC1P52823 247 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 H2BFSP57053 126 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC26A5P58743 744 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TPI1P60174 286 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB2AP61019 212 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RAP1AP62834 184 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RPL38P63173 70 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DGCR2P98153 550 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 PITPNAQ00169 270 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CDK5Q00535 292 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 BCL2L1Q07817 233 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SNTB2Q13425 540 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GAB1Q13480 694 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 HNF4GQ14541 408 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 MELKQ14680 651 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GANABQ14697 944 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZBTB6Q15916 424 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RBBP7Q16576 425 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C2orf68Q2NKX9 166 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C2orf27AQ580R0 203 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 THEM4Q5T1C6 240 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 HLA-DQA1Q5Y7H0 255 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TCEAL6Q6IPX3 200 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DRAM2Q6UX65 266 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 LRRN1Q6UXK5 716 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 IL34Q6ZMJ4 242 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DEF8Q6ZN54 512 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 MBOAT1Q6ZNC8 495 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ABHD13Q7L211 337 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RTL10Q7L3V2 364 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OTOP2Q7RTS6 562 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 BHLHA9Q7RTU4 235 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C6orf120Q7Z4R8 191 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TECPR1Q7Z6L1 1165 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DNAJB7Q7Z6W7 309 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 PXKQ7Z7A4 578 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SCD5Q86SK9 330 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 LDB1Q86U70 411 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 PARGQ86W56 976 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GPSM1Q86YR5 675 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DCUN1D3Q8IWE4 304 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GPR65Q8IYL9 337 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZFP82Q8N141 532 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TOMM5Q8N4H5 51 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 HDDC3Q8N4P3 179 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZBTB2Q8N680 514 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TEX26Q8N6G2 289 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF383Q8NA42 475 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 POGLUT1Q8NBL1 392 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 AQP11Q8NBQ7 271 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM185AQ8NFB2 350 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OR10H5Q8NGA6 315 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OR8J2Q8NGG1 315 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 OR1S2Q8NGQ3 325 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 BBS10Q8TAM1 723 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 STOML3Q8TAV4 291 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ABHD4Q8TB40 342 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM151AQ8WW52 585 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 PIH1D2Q8WWB5 315 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 LCN9Q8WX39 176 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB24Q969Q5 203 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM203Q969S6 136 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC25A36Q96CQ1 311 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF558Q96NG5 402 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms