RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 MSH4O15457 936 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 POLR2DO15514 142 aaKnown RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 SRPX2O60687 465 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ERLIN1O75477 346 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 NPIPA8P0DM63 369 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 HMGCS2P54868 508 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ATP5IP56385 69 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 BEX3Q00994 111 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ZNF154Q13106 437 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 GANABQ14697 944 aaKnown RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 PPP1R3AQ16821 1122 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 SLC5A12Q1EHB4 618 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 SNAI3Q3KNW1 292 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 NHLRC3Q5JS37 347 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 DCST2Q5T1A1 773 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ZNF57Q68EA5 555 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 FAM71F2Q6NXP2 309 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 STAC2Q6ZMT1 411 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 MOB3BQ86TA1 216 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 CCDC50Q8IVM0 306 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 TPD52L3Q96J77 140 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 MS4A14Q96JA4 679 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 SLC39A3Q9BRY0 314 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 METTL7AQ9H8H3 244 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 AMBNQ9NP70 447 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 PAK1IP1Q9NWT1 392 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ZNF221Q9UK13 617 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 NPIPA1Q9UND3 350 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 FRMPD4Q14CM0 1322 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 ANKARQ7Z5J8 1434 aa4.61□□□□□ -1.67
HCFC2-204ENST00000550335 MED1Q15648 1581 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 COL16A1Q07092 1604 aaPredicted RBP4.61□□□□□ -1.67
HCFC2-204ENST00000550335 IGHV3OR16-12A0A075B7B8 117 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 E9PAM4 449 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 FOXE1O00358 373 aaPredicted RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 SAP18O00422 153 aaKnown RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 P2RY1P47900 373 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 IST1P53990 364 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 OC90Q02509 493 aaPredicted RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 PAX8Q06710 450 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 CUL2Q13617 745 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 NDUFA9Q16795 377 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 MICAQ29983 383 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 C17orf58Q2M2W7 97 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 VWA2Q5GFL6 755 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 OTUD3Q5T2D3 398 aaPredicted RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 PDZK1Q5T2W1 519 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 OR4F3Q6IEY1 312 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 CCDC65Q8IXS2 484 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 NECAB1Q8N987 351 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 OR6T1Q8NGN1 323 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 SCFD1Q8WVM8 642 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 IL1F10Q8WWZ1 152 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 MCCC1Q96RQ3 725 aaPredicted RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 HCAR1Q9BXC0 346 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 SGK2Q9HBY8 427 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 EXOSC3Q9NQT5 275 aaKnown RBP4.6□□□□□ -1.67
HCFC2-204ENST00000550335 DHRS4-AS1Q9P1J3 65 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 SUN2Q9UH99 717 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 CLSPNQ9HAW4 1339 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 NALCNQ8IZF0 1738 aa4.6□□□□□ -1.67
HCFC2-204ENST00000550335 TDRD15B5MCY1 1934 aaKnown RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 E9PLD3 99 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 KIF2AO00139 706 aaPredicted RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 TIMM8AO60220 97 aaPredicted RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 ADGRB2O60241 1585 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 PHLPP1O60346 1717 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 FCMRO60667 390 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 RAMP1O60894 148 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 UQCRFS1P1P0C7P4 283 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 POLR2EP19388 210 aaKnown RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 BCL3P20749 454 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SERPINA2P20848 420 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 FNTAP49354 379 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 CCT3P49368 545 aaKnown RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 COX10Q12887 443 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 MRPL28Q13084 256 aaKnown RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 KCNJ11Q14654 390 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 LAGE3Q14657 143 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SHPRHQ149N8 1683 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 IMMTQ16891 758 aaKnown RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SLC22A6Q4U2R8 563 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 NHSL1Q5SYE7 1610 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 TPGS2Q68CL5 300 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 ZNF772Q68DY9 489 aaPredicted RBP4.59□□□□□ -1.67
HCFC2-204ENST00000550335 ZNF613Q6PF04 617 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SLC25A42Q86VD7 318 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 OR10A7Q8NGE5 316 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 ITLN1Q8WWA0 313 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 NOTCH4Q99466 2003 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 VGLL1Q99990 258 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 CCDC77Q9BR77 488 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 TM2D1Q9BX74 207 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 VPS33BQ9H267 617 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 LRRN3Q9H3W5 708 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 PANK3Q9H999 370 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.67
HCFC2-204ENST00000550335 SBNO1A3KN83 1393 aa4.58□□□□□ -1.68
HCFC2-204ENST00000550335 PNPLA6Q8IY17 1366 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms