RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	FOPNL	Q96NB1	174 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	CCT7	Q99832	543 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	ZNF416	Q9BWM5	594 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	NFKBIZ	Q9BYH8	718 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	NMRK1	Q9NWW6	199 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	ZNF490	Q9ULM2	529 aa	Predicted RBP	2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	UBQLN1	Q9UMX0	589 aa	Known RBP	2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	MGAT4B	Q9UQ53	548 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	PRG3	Q9Y2Y8	225 aa	Predicted RBP	2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	GMPPB	Q9Y5P6	360 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	MET	P08581	1390 aa		2.6	□□□□□ -1.99
CNOT2-222	ENST00000550155	PTCH1	Q13635	1447 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	NCAPD2	Q15021	1401 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	NKX2-6	A6NCS4	301 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	PCP4L1	A6NKN8	68 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155		A8MUA0	341 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TRAF3IP2	O43734	574 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TBX19	O60806	448 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	UFL1	O94874	794 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	PCCB	P05166	539 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	PDHB	P11177	359 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	SH3BGR	P55822	239 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	LRIT3	Q3SXY7	679 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	SLC36A3	Q495N2	470 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	BOLA3	Q53S33	107 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TMEM41B	Q5BJD5	291 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TSPO2	Q5TGU0	170 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	OR8G2P	Q6IF36	304 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	OR6B2	Q6IFH4	312 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	RNF165	Q6ZSG1	346 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TAS2R42	Q7RTR8	314 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	LRRC70	Q7Z2Q7	622 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	MISP	Q8IVT2	679 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	CENPL	Q8N0S6	344 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	ARFGAP2	Q8N6H7	521 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	OR52E1	Q8NGJ3	308 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	OR9A4	Q8NGU2	314 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	RLN3	Q8WXF3	142 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	MRPL38	Q96DV4	380 aa	Known RBP	2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	DTNBP1	Q96EV8	351 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TPD52L3	Q96J77	140 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	TMEM231	Q9H6L2	316 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	RMND5A	Q9H871	391 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	VAT1L	Q9HCJ6	419 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	GDAP2	Q9NXN4	497 aa		2.59	□□□□□ -1.99
CNOT2-222	ENST00000550155	KANK1	Q14678	1352 aa		2.59	□□□□□ -2
CNOT2-222	ENST00000550155	TMEM89	A2RUT3	159 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	CTAGE15	A4D2H0	777 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155		H0YC42	278 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155		H3BTX0	84 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	DLGAP1	O14490	977 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	CASK	O14936	926 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ALOX15B	O15296	676 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	NPIPB7	O75200	414 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	SPAG6	O75602	509 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	H2AFX	P16104	143 aa	Predicted RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	HTR2A	P28223	471 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	PBLD	P30039	288 aa	Predicted RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	MYBPC1	Q00872	1141 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	HSF2	Q03933	536 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	CHIT1	Q13231	466 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ARFRP1	Q13795	201 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	PDK3	Q15120	406 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	NSDHL	Q15738	373 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	TATDN3	Q17R31	274 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ZSWIM7	Q19AV6	140 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	RABL6	Q3YEC7	729 aa	Predicted RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	IL23R	Q5VWK5	629 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	WDR74	Q6RFH5	385 aa	Predicted RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	WDR88	Q6ZMY6	472 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ZFP2	Q6ZN57	461 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	PAQR9	Q6ZVX9	377 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	HSD11B1L	Q7Z5J1	315 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ADAMTSL2	Q86TH1	951 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	CTAGE6	Q86UF2	777 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	TPRX1	Q8N7U7	411 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ZNF740	Q8NDX6	193 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	OR52M1	Q8NGK5	317 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	DQX1	Q8TE96	717 aa	Known RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	OR1E3	Q8WZA6	343 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	FCGR1B	Q92637	280 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	CNDP1	Q96KN2	507 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	COQ7	Q99807	217 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	ARHGDIG	Q99819	225 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	SLC39A3	Q9BRY0	314 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	PKIB	Q9C010	78 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	POLD4	Q9HCU8	107 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	SOHLH2	Q9NX45	425 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	BTNL2	Q9UIR0	455 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	EIF3L	Q9Y262	564 aa	Known RBP	2.58	□□□□□ -2
CNOT2-222	ENST00000550155	MAB21L2	Q9Y586	359 aa		2.58	□□□□□ -2
CNOT2-222	ENST00000550155	PSMB11	A5LHX3	300 aa		2.57	□□□□□ -2
CNOT2-222	ENST00000550155	WBP4	O75554	376 aa	Known RBP	2.57	□□□□□ -2
CNOT2-222	ENST00000550155	RRAS	P10301	218 aa		2.57	□□□□□ -2
CNOT2-222	ENST00000550155	EPB41	P11171	864 aa	Known RBP	2.57	□□□□□ -2
CNOT2-222	ENST00000550155	BCKDHA	P12694	445 aa		2.57	□□□□□ -2
CNOT2-222	ENST00000550155	MAG	P20916	626 aa		2.57	□□□□□ -2
CNOT2-222	ENST00000550155	PRDX3	P30048	256 aa	Known RBP	2.57	□□□□□ -2
CNOT2-222	ENST00000550155	CASQ1	P31415	396 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms