RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 METTL13Q8N6R0 699 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 VN1R2Q8NFZ6 395 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 OR6T1Q8NGN1 323 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 OR52J3Q8NH60 311 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 DNAJA3Q96EY1 480 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 RBM18Q96H35 190 aaKnown RBP3.16□□□□□ -1.9
PTCH1-216ENST00000548379 C9orf85Q96MD7 179 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 VSTM2LQ96N03 204 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 CARD6Q9BX69 1037 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 POMKQ9H5K3 350 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 COQ10BQ9H8M1 238 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 GPN2Q9H9Y4 310 aaPredicted RBP3.16□□□□□ -1.9
PTCH1-216ENST00000548379 LPAR2Q9HBW0 351 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 AGPAT5Q9NUQ2 364 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 TBK1Q9UHD2 729 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 SH3BGRL2Q9UJC5 107 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 B9D1Q9UPM9 204 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 RNF6Q9Y252 685 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 RLFQ13129 1914 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 CDH23Q9H251 3354 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 FRMPD4Q14CM0 1322 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 LRRC37A2A6NM11 1700 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 MUC3AQ02505 3323 aa3.16□□□□□ -1.9
PTCH1-216ENST00000548379 COL1A2P08123 1366 aa3.15□□□□□ -1.9
PTCH1-216ENST00000548379 PTPRFP10586 1907 aa3.15□□□□□ -1.9
PTCH1-216ENST00000548379 COL4A6Q14031 1691 aa3.15□□□□□ -1.9
PTCH1-216ENST00000548379 XIRP2A4UGR9 3374 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 GSTTP1A0A1W2PQM5 241 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 LRRC30A6NM36 301 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 HIDE1A8MVS5 230 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 WASH3PC4AMC7 463 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF253O75346 499 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 IFNB1P01574 187 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 HEXBP07686 556 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 NCF1P14598 390 aaPredicted RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 PVRP15151 417 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 CYP2F1P24903 491 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 PTGFRP43088 359 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 PTGER3P43115 390 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 OR1D4P47884 311 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 TFDP1Q14186 410 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 EIF2B1Q14232 305 aaKnown RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ABRAXAS2Q15018 415 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 LINC01620Q4KN68 170 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 PNCKQ6P2M8 343 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 LRRC8BQ6P9F7 803 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 AFTPHQ6ULP2 937 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 WASH2PQ6VEQ5 465 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 LPCAT2Q7L5N7 544 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 SLC39A11Q8N1S5 342 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 OR5AU1Q8NGC0 362 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ART4Q93070 314 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 CASD1Q96PB1 797 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 SPZ1Q9BXG8 430 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 UBXN6Q9BZV1 441 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 GLT8D2Q9H1C3 349 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 RWDD1Q9H446 243 aaPredicted RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 COG4Q9H9E3 785 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF302Q9NR11 478 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 NRBP2Q9NSY0 501 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 SLC35D1Q9NTN3 355 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 FAM120CQ9NX05 1096 aaKnown RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 DUS2Q9NX74 493 aaKnown RBP3.15□□□□□ -1.91
PTCH1-216ENST00000548379 SENP1Q9P0U3 644 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 DHRS4-AS1Q9P1J3 65 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ATP6V1HQ9UI12 483 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 RAB23Q9ULC3 237 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 DUSP12Q9UNI6 340 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 MFHAS1Q9Y4C4 1052 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 UBIAD1Q9Y5Z9 338 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 EYSQ5T1H1 3165 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 NFASCO94856 1347 aa3.15□□□□□ -1.91
PTCH1-216ENST00000548379 ATAD5Q96QE3 1844 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 RALGAPA1Q6GYQ0 2036 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 A0A087WWV3 80 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF840PA6NDX5 716 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 FAM220BPB1ANY3 271 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 C11orf98E9PRG8 122 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 SDHDO14521 159 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 PHF1O43189 567 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 BCL2L11O43521 198 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CYTH3O43739 400 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 SRPX2O60687 465 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 OR4F21O95013 312 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TBX6O95947 436 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 PIGRP01833 764 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 KRT8P05787 483 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 THRBP10828 461 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TSPAN8P19075 237 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 HTR2AP28223 471 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CYLC1P35663 651 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 BRCC3P46736 316 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 METAP1P53582 386 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 NAPAP54920 295 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 SLC8A3P57103 927 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 LMO4P61968 165 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 NCBP1Q09161 790 aaKnown RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 RAB35Q15286 201 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms