RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 CCDC106Q9BWC9 280 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 OR10A4Q9H209 315 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 BCL2L10Q9HD36 194 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 TIGARQ9NQ88 270 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 DNAJB12Q9NXW2 375 aaKnown RBP13.71□□□□□ -0.21
SSH1-204ENST00000546697 CALML5Q9NZT1 146 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 PCDHB14Q9Y5E9 798 aa13.71□□□□□ -0.21
SSH1-204ENST00000546697 TNFSF11O14788 317 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 DNPH1O43598 174 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 CXCL13O43927 109 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 GMFGO60234 142 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 GSNP06396 782 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 DBIP07108 87 aaKnown RBP13.7□□□□□ -0.22
SSH1-204ENST00000546697 THBS1P07996 1170 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 CCKARP32238 428 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 CD79BP40259 229 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 APOBEC1P41238 236 aaKnown RBP13.7□□□□□ -0.22
SSH1-204ENST00000546697 CARD18P57730 90 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 SESN3P58005 492 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 STX1BP61266 288 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 HPCAP84074 193 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 MYBPHQ13203 477 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
SSH1-204ENST00000546697 SGCBQ16585 318 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 PLEKHM3Q6ZWE6 761 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 MSRB3Q8IXL7 192 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 SLC43A2Q8N370 569 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 TSPEARQ8WU66 669 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 THUMPD3Q9BV44 507 aaKnown RBP13.7□□□□□ -0.22
SSH1-204ENST00000546697 BCO1Q9HAY6 547 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 ZNF446Q9NWS9 450 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 TESMINQ9Y4I5 508 aa13.7□□□□□ -0.22
SSH1-204ENST00000546697 CDHR4A6H8M9 788 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 NUDT14O95848 222 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 UBTFL6P0CB48 400 aaPredicted RBP13.69□□□□□ -0.22
SSH1-204ENST00000546697 CRISP3P54108 245 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 SQLEQ14534 574 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 RGNQ15493 299 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 GTDC1Q4AE62 458 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 GPAT3Q53EU6 434 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 METTL21CQ5VZV1 264 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 LUZP2Q86TE4 346 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 ZZZ3Q8IYH5 903 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 ZNF614Q8N883 585 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 SLC38A5Q8WUX1 472 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 NINJ1Q92982 152 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 SPDL1Q96EA4 605 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 TACO1Q9BSH4 297 aaKnown RBP13.69□□□□□ -0.22
SSH1-204ENST00000546697 SRXN1Q9BYN0 137 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 RAD21L1Q9H4I0 556 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 RABEP2Q9H5N1 569 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 A4GALTQ9NPC4 353 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 SLC25A37Q9NYZ2 338 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 ING1Q9UK53 422 aaPredicted RBP13.69□□□□□ -0.22
SSH1-204ENST00000546697 EMC9Q9Y3B6 208 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 ABCA4P78363 2273 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 HIVEP1P15822 2718 aa13.69□□□□□ -0.22
SSH1-204ENST00000546697 A0A0G2JPF8 293 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 A0A1W2PP18 115 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 CLDN24A6NM45 220 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 HNRNPCL2B2RXH8 293 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 HNRNPCL3B7ZW38 293 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
SSH1-204ENST00000546697 SYNGR4O95473 234 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 HNRNPCL4P0DMR1 293 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 ETFAP13804 333 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 AGTR1P30556 359 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 UGT2B10P36537 528 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 HTR3AP46098 478 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 DSTNP60981 165 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 GNA13Q14344 377 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 PDK3Q15120 406 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 TMEM176BQ3YBM2 270 aaPredicted RBP13.68□□□□□ -0.22
SSH1-204ENST00000546697 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 CDH24Q86UP0 819 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 ZNF440Q8IYI8 595 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 DPP10Q8N608 796 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 ARFGAP2Q8N6H7 521 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 CNEP1R1Q8N9A8 125 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 CNOT9Q92600 299 aaKnown RBP13.68□□□□□ -0.22
SSH1-204ENST00000546697 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 ADAM19Q9H013 955 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 QRSL1Q9H0R6 528 aaKnown RBP13.68□□□□□ -0.22
SSH1-204ENST00000546697 CCDC134Q9H6E4 229 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 TMEM185BQ9H7F4 350 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 KLHL13Q9P2N7 655 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 CHST2Q9Y4C5 530 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 MPDZO75970 2070 aa13.68□□□□□ -0.22
SSH1-204ENST00000546697 SH3D21A4FU49 640 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 CLIC1O00299 241 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 ZNF208O43345 1280 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms