RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DIAPH2O60879 1101 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 ERLIN1O75477 346 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
YBX3-218ENST00000546298 ENPP1P22413 925 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 IL32P24001 234 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 APOBEC1P41238 236 aaKnown RBP8.34□□□□□ -1.07
YBX3-218ENST00000546298 SESN3P58005 492 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 PHC1P78364 1004 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 MERTKQ12866 999 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 SKP2Q13309 424 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 GNA13Q14344 377 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 GPAT3Q53EU6 434 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 PRSS57Q6UWY2 283 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 TMPPEQ6ZT21 453 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 PLEKHM3Q6ZWE6 761 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 CMIPQ8IY22 773 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 CLEC4FQ8N1N0 589 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 ZNF619Q8N2I2 560 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 GLB1L3Q8NCI6 653 aaPredicted RBP8.34□□□□□ -1.07
YBX3-218ENST00000546298 ZNF563Q8TA94 476 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 RAB3IL1Q8TBN0 382 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 HSD17B8Q92506 261 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 PMM1Q92871 262 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 RAB8BQ92930 207 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 ZHX1-C8orf76Q96EF9 292 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 C18orf12Q96KH6 178 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 MARK4Q96L34 752 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 CCDC115Q96NT0 180 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 OR5B2Q96R09 309 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 PANX1Q96RD7 426 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 SLC35A5Q9BS91 424 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 SAP130Q9H0E3 1048 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 AIG1Q9NVV5 245 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 KIAA1549Q9HCM3 1950 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 TMEM120BA0PK00 339 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 CCDC154A6NI56 674 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ZNF724A8MTY0 619 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ESPNB1AK53 854 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 SULT2B1O00204 365 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 SDHDO14521 159 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ANKRD17O75179 2603 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 KRT75O95678 551 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 PGRP06401 933 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 THBDP07204 575 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 FESP07332 822 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 INHBBP09529 407 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 TFPIP10646 304 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 NID1P14543 1247 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 IDO1P14902 403 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 UQCRBP14927 111 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 LOXP28300 417 aaPredicted RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 ADSLP30566 484 aaPredicted RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 RYKP34925 604 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 PGM1P36871 562 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 MAGEA8P43361 318 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 HTR3AP46098 478 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 CLK1P49759 484 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 SLC18A1P54219 525 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 CASP9P55211 416 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 NME5P56597 212 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 KCNJ10P78508 379 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 RASGEF1BQ0VAM2 473 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ITGADQ13349 1161 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 KRTAP21-3Q3LHN1 58 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 SYT14P1Q58G82 188 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 Q5PR19 223 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 SFRP5Q5T4F7 317 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 TYW3Q6IPR3 259 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 ZNF704Q6ZNC4 412 aaPredicted RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ZNF621Q6ZSS3 439 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 C22orf34Q6ZV56 151 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 NUFIP2Q7Z417 695 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 GRINAQ7Z429 371 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 GALNT5Q7Z7M9 940 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 RNF130Q86XS8 419 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 GABRG1Q8N1C3 465 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 ARFGAP2Q8N6H7 521 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 S100PBPQ96BU1 408 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 PLPPR2Q96GM1 343 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 TRNT1Q96Q11 434 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 OR52E6Q96RD3 313 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 BDH2Q9BUT1 245 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 QRSL1Q9H0R6 528 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 BCO1Q9HAY6 547 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 EXOSC3Q9NQT5 275 aaKnown RBP8.33□□□□□ -1.08
YBX3-218ENST00000546298 EMC3Q9P0I2 261 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 KCNE5Q9UJ90 142 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 PRDM4Q9UKN5 801 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
YBX3-218ENST00000546298 MTORP42345 2549 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 HMGN4O00479 90 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms