RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ASF1BQ9NVP2 202 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 STOX2Q9P2F5 926 aaPredicted RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 CD8B2A6NJW9 211 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 RNASET2O00584 256 aaKnown RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 HOXA2O43364 376 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 BNIP3LO60238 219 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 OR10H2O60403 315 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 ANXA2P07355 339 aaKnown RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 CD8BP10966 210 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 ZNF35P13682 527 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 ANXA7P20073 488 aaKnown RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 CNR1P21554 472 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 RNF144AP50876 292 aaPredicted RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 OR2B8PP59922 312 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 SNRPD1P62314 119 aaKnown RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 HTRA4P83105 476 aaPredicted RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 SNTB2Q13425 540 aaKnown RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 OR52W1Q6IF63 320 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 SLC30A6Q6NXT4 461 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 PGAP1Q75T13 922 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 HSD11B1LQ7Z5J1 315 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 HUS1BQ8NHY5 278 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 RNFT2Q96EX2 444 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 FAM83CQ9BQN1 747 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 EDEM2Q9BV94 578 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 TMEM121BQ9BXQ6 578 aaPredicted RBP7.33□□□□□ -1.24
UBR1-202ENST00000546274 ZDHHC6Q9H6R6 413 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 SGK2Q9HBY8 427 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 TREM1Q9NP99 234 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 THSD1Q9NS62 852 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 PIPOXQ9P0Z9 390 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 SH2B3Q9UQQ2 575 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 POFUT2Q9Y2G5 429 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 INSL5Q9Y5Q6 135 aa7.33□□□□□ -1.24
UBR1-202ENST00000546274 SHISA3A0PJX4 238 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 OR2AG2A6NM03 316 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 SOD2P04179 222 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 CD2P06729 351 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 IGFBP1P08833 259 aaPredicted RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 OR8U8P0C7N1 319 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 PEPDP12955 493 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 HSD3B1P14060 373 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 HSD3B2P26439 372 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 IMPA1P29218 277 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 ILF3Q12906 894 aaKnown RBP eCLIP7.32□□□□□ -1.24
UBR1-202ENST00000546274 TMEM255AQ5JRV8 349 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 TMEM71Q6P5X7 295 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 AGTRAPQ6RW13 159 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 HS6ST3Q8IZP7 471 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 OR4K1Q8NGD4 311 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 AUTS2Q8WXX7 1259 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 NAA11Q9BSU3 229 aaPredicted RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 PINK1Q9BXM7 581 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 RSPO3Q9BXY4 272 aaPredicted RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 LINC00597Q9H2U6 94 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 TMPRSS5Q9H3S3 457 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 OPA3Q9H6K4 179 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 ACER3Q9NUN7 267 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 CORO2BQ9UQ03 480 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 MKI67P46013 3256 aaKnown RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 FAM227AF5H4B4 570 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 RTCAO00442 366 aaKnown RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 SOX30O94993 753 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 SLC16A8O95907 504 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 EIF4EP06730 217 aaKnown RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 UCHL1P09936 223 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 TIA1P31483 386 aaKnown RBP eCLIP7.32□□□□□ -1.243e-6■■■■□ 20.5
UBR1-202ENST00000546274 ETV5P41161 510 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 PITPNBP48739 271 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 UBXN2BQ14CS0 331 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.32□□□□□ -1.24
UBR1-202ENST00000546274 WDR53Q7Z5U6 358 aaPredicted RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 MISPQ8IVT2 679 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 NAXDQ8IW45 347 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 SLC30A8Q8IWU4 369 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 CMTM8Q8IZV2 173 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 POMGNT2Q8NAT1 580 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 OR1S2Q8NGQ3 325 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 OR56A3Q8NH54 315 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 MED8Q96G25 268 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 SCLYQ96I15 445 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 TSSK6Q9BXA6 273 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 C20orf85Q9H1P6 137 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 WDR26Q9H7D7 661 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 MVB12BQ9H7P6 319 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 C1GALT1Q9NS00 363 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 RHCGQ9UBD6 479 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 ZNF629Q9UEG4 869 aaPredicted RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 C9orf170A2RU37 121 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 A8MVJ9 347 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 H3BN98 237 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 KRT33AO76009 404 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 PPIBP23284 216 aaKnown RBP7.32□□□□□ -1.24
UBR1-202ENST00000546274 ADH6P28332 368 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 DDTP30046 118 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 CALCRP30988 508 aa7.32□□□□□ -1.24
UBR1-202ENST00000546274 CRATP43155 626 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms