RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	KIR2DL3	P43628	341 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	CCT3	P49368	545 aa	Known RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	STAR	P49675	285 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	CLNS1A	P54105	237 aa	Known RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	KRTAP10-9	P60411	292 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	HBA1	P69905	142 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	POU6F2	P78424	691 aa	Predicted RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	BST1	Q10588	318 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	STX3	Q13277	289 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	SPDYE7P	Q495Y7	208 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	FLYWCH1	Q4VC44	716 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	HHAT	Q5VTY9	493 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	OR2A2	Q6IF42	318 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	OGFOD2	Q6N063	350 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	MTERF4	Q7Z6M4	381 aa	Known RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	GALNT10	Q86SR1	603 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	TMEM200A	Q86VY9	491 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	METTL25	Q8N6Q8	603 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	ZNF527	Q8NB42	609 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	OR4C3	Q8NH37	302 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	RAB3IL1	Q8TBN0	382 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	ACTRT2	Q8TDY3	377 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	ADAMTS15	Q8TE58	950 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	DUSP19	Q8WTR2	217 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	CDS1	Q92903	461 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	ZBTB8A	Q96BR9	441 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	TESC	Q96BS2	214 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	OTUB1	Q96FW1	271 aa	Predicted RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	C16orf58	Q96GQ5	468 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	PPP1R36	Q96LQ0	422 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	NUF2	Q9BZD4	464 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	PIGM	Q9H3S5	423 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	CXorf36	Q9H7Y0	433 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	MEAF6	Q9HAF1	191 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	KCNK9	Q9NPC2	374 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	PACSIN3	Q9UKS6	424 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	FAF1	Q9UNN5	650 aa	Predicted RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	ZNF175	Q9Y473	711 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	SPEF1	Q9Y4P9	236 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	AP4B1	Q9Y6B7	739 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	OTOG	Q6ZRI0	2925 aa		6.91	□□□□□ -1.3
SNHG1-223	ENST00000545440	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	RNF103-CHMP3	A0A140T963	221 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	DUXA	A6NLW8	204 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440		E9PBE3	544 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440		H3BML4	177 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ANKRD28	O15084	1053 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CFLAR	O15519	480 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	SNN	O75324	88 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CTAG2	O75638	210 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	TNFSF13	O75888	250 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	GOSR1	O95249	250 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	TGM6	O95932	706 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	AK1	P00568	194 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	LBP	P18428	481 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ATP6V1C1	P21283	382 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ELK4	P28324	431 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	SOAT1	P35610	550 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	PCYT1A	P49585	367 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ZNF41	P51814	821 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	SUMO3	P55854	103 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CLDN15	P56746	228 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	RPS3A	P61247	264 aa	Known RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	PHC1	P78364	1004 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	FOXF2	Q12947	444 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	FGFBP1	Q14512	234 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CD226	Q15762	336 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	MLANA	Q16655	118 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	PLPPR5	Q32ZL2	321 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	BEND6	Q5SZJ8	279 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	DCST2	Q5T1A1	773 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CCNJ	Q5T5M9	372 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	OR4F3	Q6IEY1	312 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CHMP1B	Q7LBR1	199 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	P4HA3	Q7Z4N8	544 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	GGN	Q86UU5	652 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	UBQLNL	Q8IYU4	475 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	GCNT2	Q8N0V5	402 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440		Q8N3U1	123 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ANKRD42	Q8N9B4	389 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	OR5AK3P	Q8NH89	298 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	FAM222B	Q8WU58	562 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	OIT3	Q8WWZ8	545 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	INTS12	Q96CB8	462 aa	Known RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	TLCD1	Q96CP7	247 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	CHMP6	Q96FZ7	201 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	SLC35G5	Q96KT7	338 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	OR7D2	Q96RA2	312 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	DPY30	Q9C005	99 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	HOXD1	Q9GZZ0	328 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	RNF122	Q9H9V4	155 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	THAP1	Q9NVV9	213 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	FBXO34	Q9NWN3	711 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	VDAC3	Q9Y277	283 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	ZNF337	Q9Y3M9	751 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440	PRR14L	Q5THK1	2151 aa		6.9	□□□□□ -1.3
SNHG1-223	ENST00000545440		A0A1W2PNV4	684 aa		6.89	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms