RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
COPS7A-220ENST00000544725 C16orf58Q96GQ5 468 aa12.79□□□□□ -0.36
COPS7A-220ENST00000544725 ZNF764Q96H86 408 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-220ENST00000544725 BHLHE41Q9C0J9 482 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-220ENST00000544725 BPESC1Q9GZL8 116 aa12.79□□□□□ -0.36
COPS7A-220ENST00000544725 GIN1Q9NXP7 522 aa12.79□□□□□ -0.36
COPS7A-220ENST00000544725 PKD1L1Q8TDX9 2849 aa12.79□□□□□ -0.36
COPS7A-220ENST00000544725 H6PDO95479 791 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 EGR1P18146 543 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 CSNK2A1P68400 391 aaPredicted RBP12.78□□□□□ -0.36
COPS7A-220ENST00000544725 C2orf54Q08AI8 447 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 MST1LQ2TV78 715 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 ABLIM2Q6H8Q1 611 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 ANKRD26P1Q6NSI1 321 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 PAFAH2Q99487 392 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
COPS7A-220ENST00000544725 SOX7Q9BT81 388 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 DUSP22Q9NRW4 184 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 SERINC1Q9NRX5 453 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 NINJ2Q9NZG7 142 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 MALT1Q9UDY8 824 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
COPS7A-220ENST00000544725 DYSFO75923 2080 aa12.77□□□□□ -0.36
COPS7A-220ENST00000544725 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ATP6V1G2-DDX39BF2Z307 99 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ETV2O00321 342 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 GPR171O14626 319 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 RSL1D1O76021 490 aaKnown RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 PCMT1P22061 227 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ATP5F1P24539 256 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 COMPP49747 757 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 DIO1P49895 249 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 RNF144AP50876 292 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ACTG1P63261 375 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 CBFBQ13951 182 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 QPRTQ15274 297 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 EXOSC6Q5RKV6 272 aaKnown RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 TMPPEQ6ZT21 453 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 TRIM46Q7Z4K8 759 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 MTDHQ86UE4 582 aaKnown RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 SLC22A9Q8IVM8 553 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 TMCO5AQ8N6Q1 288 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 C3orf56Q8N813 242 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 LINC01356Q8N9X3 169 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 WDR31Q8NA23 367 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 RFWD2Q8NHY2 731 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 HPS1Q92902 700 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 CDS1Q92903 461 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ZHX1-C8orf76Q96EF9 292 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 STACQ99469 402 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 FUT8Q9BYC5 575 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ACSS1Q9NUB1 689 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-220ENST00000544725 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 ARFGEF3Q5TH69 2177 aa12.77□□□□□ -0.37
COPS7A-220ENST00000544725 HEATR1Q9H583 2144 aaKnown RBP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 LRP5LA4QPB2 252 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 SULT2B1O00204 365 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 EIF4E2O60573 245 aaKnown RBP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 ITGA5P08648 1049 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 CCR4P51679 360 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 CHN2P52757 468 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 PRKAA2P54646 552 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 ATP12AP54707 1039 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 FOXA1P55317 472 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 NDUFAF6Q330K2 333 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 TIGD2Q4W5G0 525 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 ZNF614Q8N883 585 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 L3HYPDHQ96EM0 354 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
COPS7A-220ENST00000544725 PIGUQ9H490 435 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 ANKZF1Q9H8Y5 726 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 SLC17A5Q9NRA2 495 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 TMEM216Q9P0N5 145 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
COPS7A-220ENST00000544725 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 ZNF264O43296 627 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 TBX19O60806 448 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 SEC22BO75396 215 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 SNUPNO95149 360 aaKnown RBP12.75□□□□□ -0.37
COPS7A-220ENST00000544725 VENTXO95231 258 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 WNT11O96014 354 aa12.75□□□□□ -0.37
COPS7A-220ENST00000544725 HMGN2P05204 90 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms