RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 Q9UFV3 132 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
DDX55-211ENST00000544429 HECTD1Q9ULT8 2610 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 CLCA1A8K7I4 914 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 C5orf58C9J3I9 102 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 AP3D1O14617 1153 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 CCR4P51679 360 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 SRYQ05066 204 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 EPS8Q12929 822 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 ART3Q13508 389 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
DDX55-211ENST00000544429 CYP51A1Q16850 503 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 POMZP3Q6PJE2 187 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 HACD2Q6Y1H2 254 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 ZNF440Q8IYI8 595 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 TMEM234Q8WY98 164 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 ZNF583Q96ND8 569 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 ZNF232Q9UNY5 417 aa17.21■□□□□ 0.35
DDX55-211ENST00000544429 HCFC1P51610 2035 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 CYP7B1O75881 506 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 SHC1P29353 583 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 PRKAR1BP31321 381 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 PCGF2P35227 344 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 EEFSECP57772 596 aaKnown RBP17.2■□□□□ 0.34
DDX55-211ENST00000544429 ZNF311Q5JNZ3 666 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 DHRS4L2Q6PKH6 230 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 ESPNLQ6ZVH7 1005 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 COMTD1Q86VU5 262 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 MEIOBQ8N635 442 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 NAXEQ8NCW5 288 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 TNIP2Q8NFZ5 429 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 WNT2BQ93097 391 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 CMTM5Q96DZ9 223 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 TRIB1Q96RU8 372 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 EFCAB1Q9HAE3 211 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
DDX55-211ENST00000544429 CFAP73A6NFT4 308 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 MFN2O95140 757 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 CHRNB4P30926 498 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 CRYBA2P53672 197 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 SELENBP1Q13228 472 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 VMACQ2NL98 169 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 PLEKHM3Q6ZWE6 761 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 CCDC80Q76M96 950 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 KRT73Q86Y46 540 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 SLC30A8Q8IWU4 369 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 UBQLNLQ8IYU4 475 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 LILRA2Q8N149 483 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 LILRB4Q8NHJ6 448 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 SDCCAG3Q96C92 435 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 REXO5Q96IC2 774 aaKnown RBP17.19■□□□□ 0.34
DDX55-211ENST00000544429 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 ADAM19Q9H013 955 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 COQ3Q9NZJ6 369 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 ANGPT4Q9Y264 503 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 ZNF175Q9Y473 711 aa17.19■□□□□ 0.34
DDX55-211ENST00000544429 KLF2Q9Y5W3 355 aaPredicted RBP17.19■□□□□ 0.34
DDX55-211ENST00000544429 FLNBO75369 2602 aaKnown RBP17.18■□□□□ 0.34
DDX55-211ENST00000544429 A0A0J9YW62 118 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 AIM2O14862 343 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 SEC14L5O43304 696 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 TPST1O60507 370 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 DCTN3O75935 186 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 CLDN14O95500 239 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 TGM6O95932 706 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 PRG2P13727 222 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 RYKP34925 604 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 IDH2P48735 452 aaKnown RBP17.18■□□□□ 0.34
DDX55-211ENST00000544429 DMTNQ08495 405 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 PLXDC2Q6UX71 529 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 MAMDC2Q7Z304 686 aaPredicted RBP17.18■□□□□ 0.34
DDX55-211ENST00000544429 GRINAQ7Z429 371 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 ARPINQ7Z6K5 226 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 CCDC71Q8IV32 467 aaPredicted RBP17.18■□□□□ 0.34
DDX55-211ENST00000544429 SLC15A3Q8IY34 581 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 ASB5Q8WWX0 329 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 KLHL15Q96M94 604 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 ZFP3Q96NJ6 502 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 ZNF607Q96SK3 696 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 HOPXQ9BPY8 73 aaPredicted RBP17.18■□□□□ 0.34
DDX55-211ENST00000544429 ECSITQ9BQ95 431 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 SPATA5L1Q9BVQ7 753 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 CMTM6Q9NX76 183 aa17.18■□□□□ 0.34
DDX55-211ENST00000544429 MPDZO75970 2070 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 HSPB2A8KAH6 182 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 RCBTB2O95199 551 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 GKN3PP0CG01 181 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 ME2P23368 584 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 AQP1P29972 269 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 APOBEC1P41238 236 aaKnown RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 SLC1A3P43003 542 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 ZNF136P52737 540 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 VEZF1Q14119 521 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 HSPB2Q16082 182 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 GKAP1Q5VSY0 366 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 C3orf33Q6P1S2 294 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 ZNF550Q7Z398 422 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms