RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 HCCSP53701 268 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 MAT1AQ00266 395 aaKnown RBP11.77□□□□□ -0.52
SMG8-202ENST00000543872 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.52
SMG8-202ENST00000543872 RPE65Q16518 533 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 GLB1LQ6UWU2 654 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 CHST9Q7L1S5 443 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 NAXDQ8IW45 347 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 CBARPQ8N350 705 aaPredicted RBP11.77□□□□□ -0.52
SMG8-202ENST00000543872 ZNF480Q8WV37 535 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 ZG16BQ96DA0 208 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 SLC35G5Q96KT7 338 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 KLHL42Q9P2K6 505 aa11.77□□□□□ -0.52
SMG8-202ENST00000543872 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.77□□□□□ -0.53
SMG8-202ENST00000543872 TMEM200CA6NKL6 621 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 F5H5P2 479 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR2A4O95047 310 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 ATP1B1P05026 303 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SYN1P17600 705 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 ITGB8P26012 769 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 ART1P52961 327 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 PRR5P85299 388 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SEZ6L2Q6UXD5 910 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 FCRLAQ7L513 359 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR1M1Q8NGA1 313 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 THAP6Q8TBB0 222 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 HAVCR2Q8TDQ0 301 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 FCAMRQ8WWV6 532 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SCLYQ96I15 445 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 GPR55Q9Y2T6 319 aaPredicted RBP11.77□□□□□ -0.53
SMG8-202ENST00000543872 CACNA1CQ13936 2221 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SPTBP11277 2137 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 GLOD5A6NK44 160 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 GYPBP06028 91 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 KLK3P07288 261 aaPredicted RBP11.77□□□□□ -0.53
SMG8-202ENST00000543872 C1GALT1C1LP0DN25 315 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 NPPBP16860 134 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 CALCRP30988 508 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 LASP1Q14847 261 aaKnown RBP11.77□□□□□ -0.53
SMG8-202ENST00000543872 AKIRIN2Q53H80 203 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 CCDC157Q569K6 752 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 MANEAQ5SRI9 462 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SLC44A3Q8N4M1 653 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
SMG8-202ENST00000543872 CYB561A3Q8NBI2 242 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR2T33Q8NG76 320 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR5J2Q8NH18 312 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 MNTQ99583 582 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 GPR62Q9BZJ7 368 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 SLC25A18Q9H1K4 315 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 EQTNQ9NQ60 294 aa11.77□□□□□ -0.53
SMG8-202ENST00000543872 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 AKR7A3O95154 331 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 SERPIND1P05546 499 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CLTBP09497 229 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 VSIG10L2P0DP72 767 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 RIPPLY1Q0D2K3 151 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 TRAM2Q15035 370 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 TP53I3Q53FA7 332 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 ZNF626Q68DY1 528 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 WDR77Q9BQA1 342 aaPredicted RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 TMPRSS13Q9BYE2 586 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CCDC86Q9H6F5 360 aaKnown RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 ZDHHC6Q9H6R6 413 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PRMT8Q9NR22 394 aaPredicted RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 C14orf105Q9NVL8 296 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 MKL2Q9ULH7 1088 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PLEKHM1Q9Y4G2 1056 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CDHR4A6H8M9 788 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CRYBA1P05813 215 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 MAGEB1P43366 347 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 AP3S2P59780 193 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 CCINQ13939 588 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 TSC22D1Q15714 1073 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 ALKBH2Q6NS38 261 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 Q6ZVL8 140 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 VRK2Q86Y07 508 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PNPLA2Q96AD5 504 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 TIMP4Q99727 224 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 ABRACLQ9P1F3 81 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 B4GALT6Q9UBX8 382 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 KCNK7Q9Y2U2 307 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PLXND1Q9Y4D7 1925 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 IGSF6O95976 241 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CHRM4P08173 479 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 CLUP10909 449 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 GALP22466 123 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 ZC3H14Q6PJT7 736 aaKnown RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 FAM98AQ8NCA5 519 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms