RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CD247P20963 164 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ADH6P28332 368 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 HTR1EP28566 365 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TACR3P29371 465 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 IFNA8P32881 189 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 APOBEC1P41238 236 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 HTR3AP46098 478 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 EIF1AXP47813 144 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 KCNJ5P48544 419 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 POLR2HP52434 150 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 GFRA1P56159 465 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PER3P56645 1201 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PCBP3P57721 371 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 SESN3P58005 492 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 CRYZQ08257 329 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 FOXD4Q12950 439 aaPredicted RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 BNIP2Q12982 314 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 SELENBP1Q13228 472 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 DUSP7Q16829 419 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ELOA3BQ3SY89 546 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 GLIPR1L2Q4G1C9 344 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 AP1ARQ63HQ0 302 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 VASNQ6EMK4 673 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 WBP2NLQ6ICG8 309 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 C3orf33Q6P1S2 294 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 C3P1Q6ZMU1 363 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 DEF8Q6ZN54 512 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PLEKHM3Q6ZWE6 761 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 CCDC80Q76M96 950 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 GRINAQ7Z429 371 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 CARM1Q86X55 608 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 LILRA2Q8N149 483 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ARHGAP24Q8N264 748 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 GTPBP8Q8N3Z3 284 aaPredicted RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 FAM71CQ8NEG0 241 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ELOA3Q8NG57 546 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 OR10Q1Q8NGQ4 319 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TAMM41Q96BW9 452 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 MRGPRX4Q96LA9 322 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 NSMCE2Q96MF7 247 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TRIB1Q96RU8 372 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 MCHR1Q99705 422 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TIMP4Q99727 224 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ZNF559Q9BR84 538 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 BTBD10Q9BSF8 475 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 C1orf21Q9H246 121 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 CTPS2Q9NRF8 586 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PLSCR2Q9NRY7 297 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 ACER3Q9NUN7 267 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TAS2R1Q9NYW7 299 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 TESQ9UGI8 421 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 TINAGQ9UJW2 476 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 SAMD4AQ9UPU9 718 aaKnown RBP5.71□□□□□ -1.5
LTBR-212ENST00000543542 TMED7Q9Y3B3 224 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 SNX13Q9Y5W8 968 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 AP4B1Q9Y6B7 739 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 V9GYQ6 96 aa5.71□□□□□ -1.5
LTBR-212ENST00000543542 PCNX3Q9H6A9 2034 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CNTRLQ7Z7A1 2325 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 PRRC2CQ9Y520 2896 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 C7orf72A4D263 438 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 AHRRA9YTQ3 701 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SYT5O00445 386 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TNFSF11O14788 317 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 LRRTM2O43300 516 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 GCM2O75603 506 aaPredicted RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 DNAJC8O75937 253 aaPredicted RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 AGFG2O95081 481 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 WISP1O95388 367 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SYNGR4O95473 234 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 LGI1O95970 557 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 IFNW1P05000 195 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TNFRSF1BP20333 461 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ACVR2AP27037 513 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ELK4P28324 431 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 GTF2E2P29084 291 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 CPOXP36551 454 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SLC1A3P43003 542 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 OR1E2P47887 323 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 LHX2P50458 406 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 B3GALT5-AS1P59052 145 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TAS2R41P59536 307 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 RAC1P63000 192 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SELENOWP63302 87 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 KCNC4Q03721 635 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 BNIP1Q12981 228 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CEACAM7Q14002 265 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 OR1Q1Q15612 314 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 BCL2A1Q16548 175 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TMEM176BQ3YBM2 270 aaPredicted RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 SPATS1Q496A3 300 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 IFI44LQ53G44 452 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 NHSL2Q5HYW2 709 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ALG10BQ5I7T1 473 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 DCST1Q5T197 706 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 C1orf185Q5T7R7 199 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 HBMQ6B0K9 141 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TMEM211Q6ICI0 200 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms