RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 DVL2O14641 736 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 GPR37L1O60883 481 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 SEMA4FO95754 770 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 HLA-DPB1P04440 258 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 LPLP06858 475 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 HNRNPA1P09651 372 aaKnown RBP eCLIP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CEBPBP17676 345 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CSNK2A2P19784 350 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 ZP3P21754 424 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 DDX6P26196 483 aaKnown RBP eCLIP4.88□□□□□ -1.63
PROM1-220ENST00000540805 SMIM11AP58511 58 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ZNF763Q0D2J5 394 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 PUM1Q14671 1186 aaKnown RBP eCLIP4.88□□□□□ -1.63
PROM1-220ENST00000540805 GINS1Q14691 196 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 LASP1Q14847 261 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 SLC5A12Q1EHB4 618 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 HFEQ30201 348 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ZNF805Q5CZA5 627 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 REEP3Q6NUK4 255 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CD200R1LQ6Q8B3 271 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CORO6Q6QEF8 472 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ALKAL2Q6UX46 152 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SLC36A4Q6YBV0 504 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 RASSF6Q6ZTQ3 369 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 P4HA3Q7Z4N8 544 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 PM20D2Q8IYS1 436 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OR8D4Q8NGM9 314 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 COQ8AQ8NI60 647 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OVCA2Q8WZ82 227 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 RAB8BQ92930 207 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 HGDQ93099 445 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CIDECQ96AQ7 238 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 C11orf24Q96F05 449 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 DCBLD2Q96PD2 775 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 THAP7Q9BT49 309 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 FGF20Q9NP95 211 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 PRDM6Q9NQX0 595 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 LYARQ9NX58 379 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 RNF215Q9Y6U7 377 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 PLXNA2O75051 1894 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 TMEM265A0A087WTH1 108 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 TEX13CA0A0J9YWL9 993 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 A0A1W2PPL8 197 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 hCG_1807616A0A1W2PRN6 198 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 TUBAL3A6NHL2 446 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OR52A4PA6NMU1 304 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 H0YIV9 168 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 PRODHO43272 600 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CDC40O60508 579 aaKnown RBP eCLIP4.88□□□□□ -1.63
PROM1-220ENST00000540805 UBXN7O94888 489 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SOX30O94993 753 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ELK1P19419 428 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SOX18P35713 384 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 AKR1C2P52895 323 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SIM1P81133 766 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 AKR1C1Q04828 323 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CDKN3Q16667 212 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 DEFB133Q30KQ1 61 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 RPS26P11Q5JNZ5 115 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CLEC12AQ5QGZ9 265 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SLC25A30Q5SVS4 291 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 IDNKQ5T6J7 187 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 KRT74Q7RTS7 529 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 VRK3Q8IV63 474 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OR7G3Q8NG95 312 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 PHOSPHO1Q8TCT1 267 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OR2M4Q96R27 311 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SECISBP2Q96T21 854 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 C19orf43Q9BQ61 176 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 CMSS1Q9BQ75 279 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CHIAQ9BZP6 476 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 RNF32Q9H0A6 362 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SDHAF2Q9NX18 166 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 MED13LQ71F56 2210 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SDK2Q58EX2 2172 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ARHGEF33A8MVX0 844 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 M0R233 179 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 MAN2B1O00754 1011 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 GMDSO60547 372 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 STX11O75558 287 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 F12P00748 615 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 BCHEP06276 602 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 OTX2P32243 289 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 MPIP34949 423 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 NUP62P37198 522 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 GNALP38405 381 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 EIF1AXP47813 144 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 SRP9P49458 86 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CSNK1EP49674 416 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 RPS13P62277 151 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 RPS21P63220 83 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 DEFA5Q01523 94 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 TAP2Q03519 686 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms