RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 COPZ1P61923 177 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 TUBA4AP68366 448 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 MYBPC1Q00872 1141 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 KCTD21Q4G0X4 260 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 ULK3Q6PHR2 472 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 SETD9Q8NE22 299 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 PIGXQ8TBF5 258 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 TMEM255BQ8WV15 326 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 NKD1Q969G9 470 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 HRASLS5Q96KN8 279 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 HS6ST2Q96MM7 605 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 CCNL2Q96S94 520 aaPredicted RBP13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 RTN4RQ9BZR6 473 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 RPS6KB2Q9UBS0 482 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 PCSK5Q92824 1860 aa13.03□□□□□ -0.32
CYB561A3-216ENST00000540755 ADAM10O14672 748 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 OIP5O43482 229 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 ANGPTL1O95841 491 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 LINGO3P0C6S8 592 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 GSSP48637 474 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 CXADRP78310 365 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 RPP38P78345 283 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF117Q03924 483 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 CHAF1BQ13112 559 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 IL10RAQ13651 578 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 NTRK2Q16620 822 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 ALG10BQ5I7T1 473 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 WBP2NLQ6ICG8 309 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 LINC00114Q6XXX2 140 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 MARCH3Q86UD3 253 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 DTX1Q86Y01 620 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 GRHL3Q8TE85 626 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 DNAJA4Q8WW22 397 aaPredicted RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 TMEM239Q8WW34 195 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 SPACA9Q96E40 222 aaPredicted RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 NODALQ96S42 347 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 APOL4Q9BPW4 351 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 P4HTMQ9NXG6 502 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 SELENONQ9NZV5 590 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 FBXL4Q9UKA2 621 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.33
CYB561A3-216ENST00000540755 KLF4O43474 513 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 ITGA10O75578 1167 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 CLPTM1O96005 669 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 FPR3P25089 353 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 EPHA2P29317 976 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 RPL5P46777 297 aaKnown RBP13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 CRISP1P54107 249 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 NUP107P57740 925 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 ISL1P61371 349 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 TSPAN31Q12999 210 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 RAPSNQ13702 412 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 NRMQ8IXM6 262 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 CADM2Q8N3J6 435 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 TMCO5AQ8N6Q1 288 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 KCNE4Q8WWG9 221 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 ARSGQ96EG1 525 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 IP6K3Q96PC2 410 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 CPNE5Q9HCH3 593 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 ICAM5Q9UMF0 924 aa13.01□□□□□ -0.33
CYB561A3-216ENST00000540755 SMIM31A0A1B0GVY4 71 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 DPPA5A6NC42 116 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 TRIM64A6NGJ6 449 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 EIF4E1BA6NMX2 242 aaKnown RBP13□□□□□ -0.33
CYB561A3-216ENST00000540755 ZAR1LA6NP61 321 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 HCRTR2O43614 444 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 SCO2O43819 266 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 OR6B1O95007 311 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 NTN1O95631 604 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 SERPINA7P05543 415 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 CHMP24386 653 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 GGT2P36268 569 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 P2RX1P51575 399 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 CCR4P51679 360 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 NR1H2P55055 460 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 MLF1P58340 268 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 PRKCDQ05655 676 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 TOP3AQ13472 1001 aaPredicted RBP13□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF791Q3KP31 576 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms