RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MUC15Q8N387 334 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
COPS7A-211ENST00000540408 ELOA3Q8NG57 546 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 OR56A1Q8NGH5 318 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 TMEM234Q8WY98 164 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 FAM168AQ92567 244 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 FCRL1Q96LA6 429 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 ATAD3AQ9NVI7 634 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 EMCNQ9ULC0 261 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 PTGDR2Q9Y5Y4 395 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
COPS7A-211ENST00000540408 NPIPA5A0A0B4J1W7 369 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 GOLGA8QA0A0J9YX86 632 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 GOLGA8OA6NCC3 632 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 E7EQL1 145 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 NPIPA7E9PJI5 369 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 GOLGA8NF8WBI6 632 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 SULT2B1O00204 365 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 PLIN3O60664 434 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 C8BP07358 591 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 CSF3P09919 207 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 NPIPA8P0DM63 369 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 UBL4AP11441 157 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 COX5AP20674 150 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 RNF144AP50876 292 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 CHRNEQ04844 493 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 QPRTQ15274 297 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 FBXW9Q5XUX1 488 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 OR7E24Q6IFN5 339 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 BHLHB9Q6PI77 547 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 RNF165Q6ZSG1 346 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 DDIASQ8IXT1 998 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 IFT20Q8IY31 132 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 OR2T11Q8NH01 316 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 OR5P2Q8WZ92 322 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 PROX1Q92786 737 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 MOAP1Q96BY2 351 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ZHX1-C8orf76Q96EF9 292 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 TRMOQ9BU70 441 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ANKZF1Q9H8Y5 726 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 TNFRSF12AQ9NP84 129 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 SIRT3Q9NTG7 399 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 ATP6V1HQ9UI12 483 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 MID2Q9UJV3 735 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 NOSIPQ9Y314 301 aaKnown RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 SPIN1Q9Y657 262 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
COPS7A-211ENST00000540408 PMF1-BGLAPU3KQ54 211 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 MXRA5Q9NR99 2828 aa11.02□□□□□ -0.65
COPS7A-211ENST00000540408 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 A0A1W2PPM1 405 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 DUXAA6NLW8 204 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 COPEO14579 308 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 GPR171O14626 319 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 SCAMP2O15127 329 aaKnown RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 SMAD9O15198 467 aaKnown RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 CFLARO15519 480 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 OIP5O43482 229 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 RAD51DO75771 328 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 CYP7B1O75881 506 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 BCKDHAP12694 445 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 PGCP20142 388 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 CRHR1P34998 444 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 DIO1P49895 249 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF83P51522 516 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 PDK3Q15120 406 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 TMPPEQ6ZT21 453 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 MTDHQ86UE4 582 aaKnown RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 OR52N5Q8NH56 324 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 SLC25A43Q8WUT9 341 aaPredicted RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 ST8SIA1Q92185 356 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 APH1AQ96BI3 265 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 PPP3R2Q96LZ3 170 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 THUMPD3Q9BV44 507 aaKnown RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 LAT2Q9GZY6 243 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 ASB6Q9NWX5 421 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 NPAP1Q9NZP6 1156 aa11.01□□□□□ -0.65
COPS7A-211ENST00000540408 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
COPS7A-211ENST00000540408 SERINC4A6NH21 518 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 H7C417 338 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 M0R1B8 84 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 HAX1O00165 279 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 LMX1BO60663 402 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 MRPL33O75394 65 aaKnown RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 IGHV3-9P01782 118 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 TFPIP10646 304 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 USF1P22415 310 aaPredicted RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 CD40P25942 277 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 FKBP2P26885 142 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms