RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 K7ERQ8 282 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 HNRNPA2B1P22626 353 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 SSTP61278 116 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SEC61A1P61619 476 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 ILKQ13418 452 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ARMC6Q6NXE6 501 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ENPP7Q6UWV6 458 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PGAP1Q75T13 922 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 CEACAM19Q7Z692 300 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZNF433Q8N7K0 673 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 RELL2Q8NC24 303 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 WDR48Q8TAF3 677 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 HGDQ93099 445 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ELP4Q96EB1 424 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SLC6A18Q96N87 628 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 DPH7Q9BTV6 452 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ACER3Q9NUN7 267 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PURGQ9UJV8 347 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 NOSIPQ9Y314 301 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 TRBV5-3A0A0A0MS03 114 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 MED19A0JLT2 244 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 DAPL1A0PJW8 107 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 OR2AG2A6NM03 316 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PRODHO43272 600 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 HYAL3O43820 417 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 FZD6O60353 706 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C6orf47O95873 294 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NMBP08949 121 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 CBSLP0DN79 551 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NR2F1P10589 423 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SPINK2P20155 84 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PSMB1P20618 241 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 CBSP35520 551 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 RPL3P39023 403 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 BUD31P41223 144 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 DLX5P56178 289 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 RAB2AP61019 212 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 E2F1Q01094 437 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 HBMQ6B0K9 141 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SLC27A4Q6P1M0 643 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 CDH26Q8IXH8 852 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ETFBKMTQ8IXQ9 262 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PLA2G15Q8NCC3 412 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 OR10H4Q8NGA5 316 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TCTEX1D2Q8WW35 142 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 S100PBPQ96BU1 408 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C20orf85Q9H1P6 137 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 AGAP14A8MT82 685 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SERPIND1P05546 499 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZNF3P17036 446 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 CSRP1P21291 193 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 AP1S1P61966 158 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TPBGQ13641 420 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TMEM44Q2T9K0 475 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 Q3ZCU0 254 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PRRT3Q5FWE3 981 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SFRP5Q5T4F7 317 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 GDPD4Q6W3E5 623 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 IQCHQ86VS3 1027 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NXPE1Q8N323 547 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 STPG2Q8N412 459 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 OR2AP1Q8NGE2 309 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NR4A3Q92570 626 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ELF4Q99607 663 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZNF251Q9BRH9 671 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SCNM1Q9BWG6 230 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 UFSP2Q9NUQ7 469 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ASF1BQ9NVP2 202 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ASIC5Q9NY37 505 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 MYEF2Q9P2K5 600 aaKnown RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 CTSFQ9UBX1 484 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TRBV4-1A0A0J9YWV2 114 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 TRABD2BA6NFA1 517 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 E9PI62 339 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SAP18O00422 153 aaKnown RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 DPM1O60762 260 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 LEFTY1O75610 366 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 HTR3BO95264 441 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SNAPINO95295 136 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 CATP04040 527 aaKnown RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 PCCBP05166 539 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 BCHEP06276 602 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 GPR1P46091 355 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 USF2Q15853 346 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 SLC5A12Q1EHB4 618 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms