RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PAQR5Q9NXK6 330 aaPredicted RBP12.3□□□□□ -0.44
CD9-208ENST00000538834 STOML1Q9UBI4 398 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 SPG11Q96JI7 2443 aa12.3□□□□□ -0.44
CD9-208ENST00000538834 ALPK2Q86TB3 2170 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 A0A1W2PNV4 684 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 FXYD1O00168 92 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 DVL2O14641 736 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 SLC22A2O15244 555 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 GCM2O75603 506 aaPredicted RBP12.29□□□□□ -0.44
CD9-208ENST00000538834 AQP8O94778 261 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 PGM3O95394 542 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 BCHEP06276 602 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 VIMP08670 466 aaKnown RBP12.29□□□□□ -0.44
CD9-208ENST00000538834 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
CD9-208ENST00000538834 TMIGD3P0DMS9 266 aaPredicted RBP12.29□□□□□ -0.44
CD9-208ENST00000538834 PGCP20142 388 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 SLC6A8P48029 635 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 ASCL1P50553 236 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 EPS8Q12929 822 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 ZSWIM7Q19AV6 140 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 MRPL2Q5T653 305 aaKnown RBP12.29□□□□□ -0.44
CD9-208ENST00000538834 PLEKHM3Q6ZWE6 761 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 ZNF614Q8N883 585 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 OR10D3Q8NH80 312 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 FNDC9Q8TBE3 224 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 WDR60Q8WVS4 1066 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 STARD4Q96DR4 205 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 C14orf79Q96F83 325 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 KLHL15Q96M94 604 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 CGREF1Q99674 301 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 PINK1Q9BXM7 581 aa12.29□□□□□ -0.44
CD9-208ENST00000538834 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 FAM221AA4D161 298 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 A8MXE2 369 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 NPPAP01160 153 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 PCBP3P57721 371 aaKnown RBP12.28□□□□□ -0.44
CD9-208ENST00000538834 RPS3AP61247 264 aaKnown RBP12.28□□□□□ -0.44
CD9-208ENST00000538834 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 SELPLGQ14242 412 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 GNA13Q14344 377 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 PON3Q15166 354 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 OR2A2Q6IF42 318 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 ZNF836Q6ZNA1 936 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 HMGN2P46Q86SG4 172 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 VRK2Q86Y07 508 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 PEX5LQ8IYB4 626 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 CLIP4Q8N3C7 705 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 OR52P1PQ8NH57 321 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 OR2V1Q8NHB1 315 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 TMEM234Q8WY98 164 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 MAL2Q969L2 176 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 SPATA9Q9BWV2 254 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 KAT8Q9H7Z6 458 aaKnown RBP12.28□□□□□ -0.44
CD9-208ENST00000538834 FOXD3Q9UJU5 478 aaPredicted RBP12.28□□□□□ -0.44
CD9-208ENST00000538834 ING1Q9UK53 422 aaPredicted RBP12.28□□□□□ -0.44
CD9-208ENST00000538834 CORO2BQ9UQ03 480 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
CD9-208ENST00000538834 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 AP3D1O14617 1153 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 SEC14L5O43304 696 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 CXCL13O43927 109 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 FZD7O75084 574 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 PABPC4LP0CB38 370 aaKnown RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 IL7RP16871 459 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 BMP5P22003 454 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 APOBEC1P41238 236 aaKnown RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 RAC3P60763 192 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 HPCAP84074 193 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 REEP3Q6NUK4 255 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 GRINAQ7Z429 371 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 DHDDSQ86SQ9 333 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 COMTD1Q86VU5 262 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 CALHM3Q86XJ0 350 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 ZNF440Q8IYI8 595 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 OSTF1Q92882 214 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 SRXN1Q9BYN0 137 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 PIGMQ9H3S5 423 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 GP6Q9HCN6 339 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 RLIMQ9NVW2 624 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 FAM53CQ9NYF3 392 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 ZNF443Q9Y2A4 671 aaPredicted RBP12.27□□□□□ -0.45
CD9-208ENST00000538834 IFT52Q9Y366 437 aa12.27□□□□□ -0.45
CD9-208ENST00000538834 POLQO75417 2590 aa12.26□□□□□ -0.45
CD9-208ENST00000538834 ANKRD17O75179 2603 aaKnown RBP12.26□□□□□ -0.45
CD9-208ENST00000538834 DYNC1I1O14576 645 aa12.26□□□□□ -0.45
CD9-208ENST00000538834 TNFSF11O14788 317 aa12.26□□□□□ -0.45
CD9-208ENST00000538834 MSTNO14793 375 aa12.26□□□□□ -0.45
CD9-208ENST00000538834 SS18L1O75177 396 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms