RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF322Q6U7Q0 402 aaPredicted RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 METAP1DQ6UB28 335 aaPredicted RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 UNQ6494/PRO21346Q6UXR6 183 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 MEPCEQ7L2J0 689 aaKnown RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 TAF8Q7Z7C8 310 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 LHFPL3Q86UP9 236 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 PARGQ86W56 976 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 CPOQ8IVL8 374 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 SIRT6Q8N6T7 355 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 LSMEM1Q8N8F7 131 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 GDPD1Q8N9F7 314 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 SYT14Q8NB59 555 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 IL17RDQ8NFM7 739 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 DOK4Q8TEW6 326 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 ZDHHC1Q8WTX9 485 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 HMGB4Q8WW32 186 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 CNOT9Q92600 299 aaKnown RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 VSTM2LQ96N03 204 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 LRFN5Q96NI6 719 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 EDEM2Q9BV94 578 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 LRRC61Q9BV99 259 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 ENKD1Q9H0I2 346 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 DUSP15Q9H1R2 295 aaPredicted RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 ABCB9Q9NP78 766 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 ATP13A2Q9NQ11 1180 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 MEPEQ9NQ76 525 aaPredicted RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 DNAJB12Q9NXW2 375 aaKnown RBP8.53□□□□□ -1.04
DDB1-211ENST00000538280 FLRT3Q9NZU0 649 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 TNFRSF10DQ9UBN6 386 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 CLCA2Q9UQC9 943 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 MED31Q9Y3C7 131 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 DMXL2Q8TDJ6 3036 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 FREM2Q5SZK8 3169 aa8.53□□□□□ -1.04
DDB1-211ENST00000538280 CEP192Q8TEP8 1941 aa8.52□□□□□ -1.04
DDB1-211ENST00000538280 ATRXP46100 2492 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 A0A1B0GWA3 101 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 LILRA5A6NI73 299 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 TTC36A6NLP5 189 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 PATE3B3GLJ2 98 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 SNPHO15079 494 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 POLR1CO15160 346 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 SSX4O60224 188 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 HCN1O60741 890 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CTNSO60931 367 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 RFPL3O75679 317 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 NSA2O95478 260 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 APOA1P02647 267 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 HLA-DPB1P04440 258 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 RNH1P13489 461 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 BMP7P18075 431 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 FUT1P19526 365 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CFL1P23528 166 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 PTBP1P26599 531 aaKnown RBP eCLIP8.52□□□□□ -1.05
DDB1-211ENST00000538280 HOXA6P31267 233 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 GALNSP34059 522 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CASP3P42574 277 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 RFX2P48378 723 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 EIF2B2P49770 351 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 RNF144AP50876 292 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 BLKP51451 505 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 PSMD4P55036 377 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 PPP3R1P63098 170 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ASAH1Q13510 395 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 BAK1Q16611 211 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ZNF791Q3KP31 576 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 ZMAT1Q5H9K5 638 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ARMC6Q6NXE6 501 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 SMARCD3Q6STE5 483 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 NPSR1Q6W5P4 371 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 TMEM91Q6ZNR0 172 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 MED25Q71SY5 747 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ZNF438Q7Z4V0 828 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 C11orf74Q86VG3 221 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 C17orf82Q86X59 251 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 MCATQ8IVS2 390 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 CMIPQ8IY22 773 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ZNF595Q8IYB9 648 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 TMEM99Q8N816 258 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 AVL9Q8NBF6 648 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ATP6V1C2Q8NEY4 427 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 OR9A4Q8NGU2 314 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 SLC2A12Q8TD20 617 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 OIT3Q8WWZ8 545 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 AP3S1Q92572 193 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 HPS1Q92902 700 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 BPIFA2Q96DR5 249 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 C1GALT1C1Q96EU7 318 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 DCLRE1CQ96SD1 692 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 SECISBP2Q96T21 854 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 TM9SF2Q99805 663 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CCDC3Q9BQI4 270 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 HCAR1Q9BXC0 346 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 TRIM2Q9C040 744 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CHRNA10Q9GZZ6 450 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 TMEM27Q9HBJ8 222 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms