RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 FOXF1Q12946 379 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 GNA13Q14344 377 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 MAPRE2Q15555 327 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 HSPB2Q16082 182 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 RUNDC3AQ59EK9 446 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 RPS26P11Q5JNZ5 115 aaPredicted RBP16.17■□□□□ 0.18
CCDC61-201ENST00000536603 ADGRE4PQ86SQ3 457 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 DHDDSQ86SQ9 333 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 PEX5LQ8IYB4 626 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 C10orf111Q8N326 155 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 NAXEQ8NCW5 288 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 FAM71CQ8NEG0 241 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 FBXO27Q8NI29 283 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 WDR60Q8WVS4 1066 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 IKZF5Q9H5V7 419 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 A4GALTQ9NPC4 353 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 DNAJB12Q9NXW2 375 aaKnown RBP16.17■□□□□ 0.18
CCDC61-201ENST00000536603 GPC6Q9Y625 555 aaPredicted RBP16.17■□□□□ 0.18
CCDC61-201ENST00000536603 GMEB1Q9Y692 573 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 INTS1Q8N201 2190 aaKnown RBP16.17■□□□□ 0.18
CCDC61-201ENST00000536603 KIAA1549Q9HCM3 1950 aa16.17■□□□□ 0.18
CCDC61-201ENST00000536603 HEATR5AQ86XA9 2040 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 A0A0G2JPF8 293 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 MBD3L4A6NDZ8 208 aaPredicted RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 MBD3L3A6NE82 208 aaPredicted RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 MBD3L5A6NJ08 208 aaPredicted RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 HNRNPCL2B2RXH8 293 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 HNRNPCL3B7ZW38 293 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 FXYD1O00168 92 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 MRASO14807 208 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 HNRNPCL1O60812 293 aaKnown RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 DBIP07108 87 aaKnown RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 HNRNPCL4P0DMR1 293 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 PRKCAP17252 672 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 IL11P20809 199 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 RPS4Y1P22090 263 aaKnown RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 ADH6P28332 368 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 RAC1P63000 192 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 NFYCQ13952 458 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 QPRTQ15274 297 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 GCNT6Q5T4J0 391 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 LIX1LQ8IVB5 337 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 C9orf106Q8NAJ2 232 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 OR52P1PQ8NH57 321 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 MBD3L2Q8NHZ7 208 aaPredicted RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 CNOT9Q92600 299 aaKnown RBP16.16■□□□□ 0.18
CCDC61-201ENST00000536603 UCN2Q96RP3 112 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 CGREF1Q99674 301 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 TMEM185BQ9H7F4 350 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 TAGLN3Q9UI15 199 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 CORO2BQ9UQ03 480 aa16.16■□□□□ 0.18
CCDC61-201ENST00000536603 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 C5orf58C9J3I9 102 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 EIF1AYO14602 144 aaKnown RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 AIM2O14862 343 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 EFNA2O43921 213 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 DNAJA2O60884 412 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 NID1P14543 1247 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 GPX2P18283 190 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 PGCP20142 388 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 ME2P23368 584 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 RYKP34925 604 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 PLAURQ03405 335 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CAPRIN1Q14444 709 aaKnown RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 MMEL1Q495T6 779 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 COQ5Q5HYK3 327 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 MRPL2Q5T653 305 aaKnown RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 GGNQ86UU5 652 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 VRK2Q86Y07 508 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 GRAMD2AQ8IUY3 354 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CMIPQ8IY22 773 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 LILRA2Q8N149 483 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 WNT2BQ93097 391 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CMTM5Q96DZ9 223 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 ZNF845Q96IR2 970 aaPredicted RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 NSL1Q96IY1 281 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 MRGPRX4Q96LA9 322 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 ANKRD27Q96NW4 1050 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CPPED1Q9BRF8 314 aaPredicted RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 SLC39A3Q9BRY0 314 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 TMUB1Q9BVT8 246 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 PINK1Q9BXM7 581 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 POLDIP3Q9BY77 421 aaKnown RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CCM2LQ9NUG4 571 aaPredicted RBP16.15■□□□□ 0.18
CCDC61-201ENST00000536603 CLCF1Q9UBD9 225 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 DSPPQ9NZW4 1301 aa16.15■□□□□ 0.18
CCDC61-201ENST00000536603 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 TGM6O95932 706 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 ARAFP10398 606 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF136P52737 540 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 SESN3P58005 492 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 MTPNP58546 118 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 RPS3AP61247 264 aaKnown RBP16.14■□□□□ 0.17
CCDC61-201ENST00000536603 GABPB1Q06547 395 aaPredicted RBP16.14■□□□□ 0.17
CCDC61-201ENST00000536603 SELPLGQ14242 412 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 SGCBQ16585 318 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 SLC25A53Q5H9E4 307 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 P4HA3Q7Z4N8 544 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 TGIF2LYQ8IUE0 185 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 METTL25Q8N6Q8 603 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms