RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 MOAP1Q96BY2 351 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FCRL1Q96LA6 429 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TNFRSF13CQ96RJ3 184 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 DHRS9Q9BPW9 319 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 KLHDC3Q9BQ90 382 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OXSMQ9NWU1 459 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ICAM5Q9UMF0 924 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CCL27Q9Y4X3 112 aa11.47□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF724A8MTY0 619 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SULT2B1O00204 365 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LSM1O15116 133 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SMAD9O15198 467 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CFLARO15519 480 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OIP5O43482 229 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 GPRIN2O60269 458 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 EIF4E2O60573 245 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PLIN3O60664 434 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CD8AP01732 235 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 C8BP07358 591 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CSF3P09919 207 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TFPIP10646 304 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 COX5AP20674 150 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 IGHV1-2P23083 117 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PTAFRP25105 342 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TTKP33981 857 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 FABP6P51161 128 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF83P51522 516 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NDUFAF6Q330K2 333 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TIGD2Q4W5G0 525 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RFTN2Q52LD8 501 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 KLHL26Q53HC5 615 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 Q6ZSR9 355 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NATD1Q8N6N6 113 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OR2T11Q8NH01 316 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OR52N5Q8NH56 324 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 OR5P2Q8WZ92 322 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 APH1AQ96BI3 265 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF300Q96RE9 604 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 PRPF18Q99633 342 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TRMOQ9BU70 441 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TNFRSF12AQ9NP84 129 aa11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SIRT3Q9NTG7 399 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NOSIPQ9Y314 301 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CUBNO60494 3623 aa11.46□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 A0A1W2PPM1 405 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 M0R1B8 84 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EFNA2O43921 213 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 IGHV3-9P01782 118 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 THBS1P07996 1170 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 BCKDHAP12694 445 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PGCP20142 388 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 DIO1P49895 249 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 VLDLRP98155 873 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MERTKQ12866 999 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.45□□□□□ -0.584e-6■■■□□ 16.5
TNFRSF1A-207ENST00000535958 PDZK1Q5T2W1 519 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FBXW9Q5XUX1 488 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SEZ6L2Q6UXD5 910 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 RNF165Q6ZSG1 346 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ZNF525Q8N782 197 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ZNF563Q8TA94 476 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SFXN5Q8TD22 340 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SLC25A43Q8WUT9 341 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ST8SIA1Q92185 356 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 THUMPD3Q9BV44 507 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MANSC1Q9H8J5 431 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ANKZF1Q9H8Y5 726 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EML4Q9HC35 981 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ASB6Q9NWX5 421 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 NPAP1Q9NZP6 1156 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ATP6V1HQ9UI12 483 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PMF1-BGLAPU3KQ54 211 aa11.45□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CADP27708 2225 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SERINC4A6NH21 518 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SMIM23A6NLE4 172 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GPR171O14626 319 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 H6PDO95479 791 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 C6orf47O95873 294 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 AK1P00568 194 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CSTAP01040 98 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 HNF1AP20823 631 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CRHR1P34998 444 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GPR68Q15743 365 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ATP6AP1LQ52LC2 224 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SYT14P1Q58G82 188 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SLC25A53Q5H9E4 307 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EXOSC6Q5RKV6 272 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 KANK2Q63ZY3 851 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR7E24Q6IFN5 339 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms