RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PAK1IP1Q9NWT1 392 aaPredicted RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 AATFQ9NY61 560 aaKnown RBP eCLIP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 TBK1Q9UHD2 729 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 DCDC2Q9UHG0 476 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 UBQLN1Q9UMX0 589 aaKnown RBP3.18□□□□□ -1.9
PRKDC-205ENST00000535375 CACNG2Q9Y698 323 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 CDH10Q9Y6N8 788 aa3.18□□□□□ -1.9
PRKDC-205ENST00000535375 CLDN5O00501 218 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 JAK2O60674 1132 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 STX11O75558 287 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 UFL1O94874 794 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 MBD3O95983 291 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 IGHV3-48P01763 117 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 CLUP10909 449 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 PAX7P23759 505 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 HTR1EP28566 365 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 EPHX2P34913 555 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 CA8P35219 290 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 IFNAR2P48551 515 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 PPOXP50336 477 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 CNTN2Q02246 1040 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
PRKDC-205ENST00000535375 SYPL1Q16563 259 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 CYS1Q717R9 158 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 C17orf82Q86X59 251 aaPredicted RBP3.17□□□□□ -1.9
PRKDC-205ENST00000535375 ARIH2OSQ8N7S6 290 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 OR2T3Q8NH03 318 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 DNAJA4Q8WW22 397 aaPredicted RBP3.17□□□□□ -1.9
PRKDC-205ENST00000535375 SLC30A2Q9BRI3 323 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 SLC25A51Q9H1U9 297 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 ZDHHC11Q9H8X9 412 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 SH2D2AQ9NP31 389 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 PALMDQ9NP74 551 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 NANSQ9NR45 359 aa3.17□□□□□ -1.9
PRKDC-205ENST00000535375 DAZ3Q9NR90 486 aaKnown RBP3.17□□□□□ -1.9
PRKDC-205ENST00000535375 UTP6Q9NYH9 597 aaKnown RBP3.17□□□□□ -1.9
PRKDC-205ENST00000535375 PPIAL4CA0A0B4J2A2 164 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 PPIAL4DF5H284 164 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 EFNA2O43921 213 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 NEBLO76041 1014 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 PPIAL4GP0DN37 164 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 ANXA3P12429 323 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 XRCC1P18887 633 aaPredicted RBP3.16□□□□□ -1.9
PRKDC-205ENST00000535375 SERPINA2P20848 420 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 NT5EP21589 574 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 PSMA5P28066 241 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 DLSTP36957 453 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 SLC10A7Q0GE19 358 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 GPM6BQ13491 265 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 USH1GQ495M9 461 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 ANKRD37Q7Z713 158 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 STEAP2Q8NFT2 490 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 ZSCAN5AQ9BUG6 496 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 TMEM117Q9H0C3 514 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 PPDPFQ9H3Y8 114 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 MEAF6Q9HAF1 191 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 CYTH4Q9UIA0 394 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 RIMS3Q9UJD0 308 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 ZNF223Q9UK11 482 aaPredicted RBP3.16□□□□□ -1.9
PRKDC-205ENST00000535375 SCML2Q9UQR0 700 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 MRPS7Q9Y2R9 242 aaKnown RBP3.16□□□□□ -1.9
PRKDC-205ENST00000535375 PLLPQ9Y342 182 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 ASTN1O14525 1302 aa3.16□□□□□ -1.9
PRKDC-205ENST00000535375 H0YCG3 227 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 ZSCAN12O43309 604 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 DUX1O43812 170 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 CSF2P04141 144 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 HBQ1P09105 142 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 GCFC2P16383 781 aaKnown RBP3.15□□□□□ -1.91
PRKDC-205ENST00000535375 TPSB2P20231 275 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 HTR1FP30939 366 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 PRPHP41219 470 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 NTHL1P78549 312 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 SPIBQ01892 262 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 RGS1Q08116 209 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 ST3GAL3Q11203 375 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 CHIT1Q13231 466 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 EBI3Q14213 229 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 TPSAB1Q15661 275 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 PDK4Q16654 411 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 TMEM52BQ4KMG9 183 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 ATAD3BQ5T9A4 648 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 PYHIN1Q6K0P9 492 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 WDR74Q6RFH5 385 aaPredicted RBP3.15□□□□□ -1.91
PRKDC-205ENST00000535375 CNPY4Q8N129 248 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF786Q8N393 782 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 RAET1EQ8TD07 263 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 SPRYD4Q8WW59 207 aaPredicted RBP3.15□□□□□ -1.91
PRKDC-205ENST00000535375 ALG12Q9BV10 488 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 CHIAQ9BZP6 476 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 DHX33Q9H6R0 707 aaKnown RBP3.15□□□□□ -1.91
PRKDC-205ENST00000535375 PATZ1Q9HBE1 687 aaKnown RBP3.15□□□□□ -1.91
PRKDC-205ENST00000535375 GSTK1Q9Y2Q3 226 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 SLCO1B1Q9Y6L6 691 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 DDX49Q9Y6V7 483 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms