RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 HSD17B8Q92506 261 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RIT1Q92963 219 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 MRPL24Q96A35 216 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ESAMQ96AP7 390 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NMD3Q96D46 503 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 FAHD2AQ96GK7 314 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 MOGAT1Q96PD6 335 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SNX18Q96RF0 628 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SERINC2Q96SA4 455 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NDNQ99608 321 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC6A7Q99884 636 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 AIF1LQ9BQI0 150 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 HAUS8Q9BT25 410 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NPLQ9BXD5 320 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PRRG4Q9BZD6 226 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM129AQ9BZQ8 928 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RTN4RQ9BZR6 473 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 BPESC1Q9GZL8 116 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 DSN1Q9H410 356 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RABEP2Q9H5N1 569 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NARFLQ9H6Q4 476 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ANKZF1Q9H8Y5 726 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZMAT3Q9HA38 289 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CBLN4Q9NTU7 201 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 VSX1Q9NZR4 365 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 KLRF1Q9NZS2 232 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 FLRT3Q9NZU0 649 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 MED11Q9P086 117 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TAGLN3Q9UI15 199 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RIMKLBQ9ULI2 386 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CAPN11Q9UMQ6 739 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 GPR52Q9Y2T5 361 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PPIAL4AQ9Y536 164 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SOX21Q9Y651 276 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 LYSTQ99698 3801 aa2.59□□□□□ -2
CHMP4A-208ENST00000534106 ARHGAP21Q5T5U3 1957 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR2M5A3KFT3 312 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 URADA6NGE7 173 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CCT8L1PA6NM43 557 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 EFCAB8A8MWE9 144 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 E7EVH7 732 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLCO1B7G3V0H7 640 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 H3BMM5 538 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CXCL13O43927 109 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 REM1O75628 298 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 LYZL6O75951 148 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PDE5AO76074 875 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 IPO7O95373 1038 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 GPR75O95800 540 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PLGP00747 810 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 GBAP04062 536 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 GYPCP04921 128 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 APRTP07741 180 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 HIST1H2AGP0C0S8 130 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 CTAGE8P0CG41 777 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 C1GALT1C1LP0DN25 315 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 COX7A2P14406 83 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ADRA2CP18825 462 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CD22P20273 847 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PSMB1P20618 241 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 HIST1H2ADP20671 130 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 IL11P20809 199 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 MDKP21741 143 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 GPX3P22352 226 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 IL32P24001 234 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ATP5A1P25705 553 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 GABRB3P28472 473 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SRD5A2P31213 254 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 GCKP35557 465 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLC1A2P43004 574 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PDLIM4P50479 330 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ZNF83P51522 516 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 GAS1P54826 345 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CDH15P55291 814 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CTBP2P56545 445 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 KRTAP10-3P60369 221 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 STXBP1P61764 594 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 UBA52P62987 128 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 POU6F2P78424 691 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 TBL3Q12788 808 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 SNX1Q13596 522 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 DAG1Q14118 895 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 EXOSC7Q15024 291 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 PPA1Q15181 289 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 BCL2A1Q16548 175 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SGCBQ16585 318 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ZSWIM7Q19AV6 140 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 GRAMD1BQ3KR37 738 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ADPRMQ3LIE5 342 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TTLL9Q3SXZ7 439 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 FAM209BQ5JX69 171 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 RBM20Q5T481 1227 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 DEPDC1Q5TB30 811 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 LGSNQ5TDP6 509 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 RAET1LQ5VY80 246 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 DUPD1Q68J44 220 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 MRNIPQ6NTE8 343 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 NIPAL1Q6NVV3 410 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLC30A6Q6NXT4 461 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLC22A25Q6T423 547 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms