RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 GABRA1P14867 456 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ZNF708P17019 499 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ME2P23368 584 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ACVR2AP27037 513 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ELK4P28324 431 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 PTGER4P35408 488 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ACAA2P42765 397 aaKnown RBP13.16□□□□□ -0.3
SF3B2-214ENST00000533595 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
SF3B2-214ENST00000533595 CLDN18P56856 261 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 SRYQ05066 204 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 MERTKQ12866 999 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 DEFB107AQ8IZN7 70 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 TNIP2Q8NFZ5 429 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 SMPDL3BQ92485 455 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 TAMM41Q96BW9 452 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 VKORC1Q9BQB6 163 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 ACER3Q9NUN7 267 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 KLHL28Q9NXS3 571 aa13.16□□□□□ -0.3
SF3B2-214ENST00000533595 FLNBO75369 2602 aaKnown RBP13.15□□□□□ -0.3
SF3B2-214ENST00000533595 H0Y3Z8 333 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 FRS3O43559 492 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 UBOX5O94941 541 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 EPPINO95925 133 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 C8BP07358 591 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 KDELR2P33947 212 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 CPOXP36551 454 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 KCNJ5P48544 419 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 CRYBA2P53672 197 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 DLX5P56178 289 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 COPZ1P61923 177 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 RAC1P63000 192 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.34e-11■■□□□ 13
SF3B2-214ENST00000533595 DUSP7Q16829 419 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 SAMD4BQ5PRF9 694 aaKnown RBP13.15□□□□□ -0.3
SF3B2-214ENST00000533595 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 COMTD1Q86VU5 262 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 UBQLNLQ8IYU4 475 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 MEIOBQ8N635 442 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
SF3B2-214ENST00000533595 CDRT15Q96T59 188 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 TMEM185BQ9H7F4 350 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 ERRFI1Q9UJM3 462 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-214ENST00000533595 MEMO1Q9Y316 297 aa13.15□□□□□ -0.3
SF3B2-214ENST00000533595 PCNX1Q96RV3 2341 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SYT5O00445 386 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 CXCR6O00574 342 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SEC14L5O43304 696 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 EFNA2O43921 213 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SEMA7AO75326 666 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 LGI1O95970 557 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 IL11P20809 199 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 CD247P20963 164 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 HTR1EP28566 365 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 APOBEC1P41238 236 aaKnown RBP13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SLC1A3P43003 542 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 HTR3AP46098 478 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 CLDN20P56880 219 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 RGS8P57771 180 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-214ENST00000533595 HOXC5Q00444 222 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SELENBP1Q13228 472 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 ACSF3Q4G176 576 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-214ENST00000533595 LRRC23Q53EV4 343 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-214ENST00000533595 C1orf185Q5T7R7 199 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 MTFR2Q6P444 385 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 RINLQ6ZS11 566 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 CADM2Q8N3J6 435 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 RNF148Q8N7C7 305 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 ZPLD1Q8TCW7 415 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 FIG4Q92562 907 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 TUBA1CQ9BQE3 449 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 CTPS2Q9NRF8 586 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 SERINC1Q9NRX5 453 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 FAM215AQ9Y5M1 114 aa13.14□□□□□ -0.31
SF3B2-214ENST00000533595 GJE1A6NN92 205 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 H0YC42 278 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 AGFG2O95081 481 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 OPN1LWP04000 364 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 FESP07332 822 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 HSD17B1P14061 328 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 ZNF136P52737 540 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
SF3B2-214ENST00000533595 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
SF3B2-214ENST00000533595 PER3P56645 1201 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 CLDN15P56746 228 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 RPS3AP61247 264 aaKnown RBP13.13□□□□□ -0.31
SF3B2-214ENST00000533595 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 CYBRD1Q53TN4 286 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 RTL6Q6ICC9 239 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 C3orf33Q6P1S2 294 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 POMZP3Q6PJE2 187 aa13.13□□□□□ -0.31
SF3B2-214ENST00000533595 RPTNQ6XPR3 784 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms