RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 AK6Q9Y3D8 172 aaKnown RBP4.01□□□□□ -1.77
C11orf54-213ENST00000533585 URGCP-MRPS24S4R325 110 aa4.01□□□□□ -1.77
C11orf54-213ENST00000533585 SPATA31D1Q6ZQQ2 1576 aa4.01□□□□□ -1.77
C11orf54-213ENST00000533585 POLR3AO14802 1390 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-213ENST00000533585 ZMYM2Q9UBW7 1377 aa4.01□□□□□ -1.77
C11orf54-213ENST00000533585 SYNJ2O15056 1496 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 A0A087WZ39 114 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 A0A1B0GUS0 222 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SNURFLB1AK76 121 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TCP10L2B9ZVM9 353 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 PRAMEF26H0Y7S4 382 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 BLOC1S5-TXNDC5H3BN57 136 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SMLR1H3BR10 107 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 NDUFAB1O14561 156 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 LIN7AO14910 233 aaPredicted RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 XRCC2O43543 280 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SLC19A2O60779 497 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 VAPBO95292 243 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 FADS2O95864 444 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 HLA-HP01893 362 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SP1P08047 785 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 UBTFL1P0CB47 393 aaPredicted RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 FAM157CP0CG43 387 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SYT1P21579 422 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 MAP2K2P36507 400 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 UGT2B10P36537 528 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 FEN1P39748 380 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 SLC1A1P43005 524 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 GPR1P46091 355 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 GNPDA1P46926 289 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 RGRP47804 291 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 QARSP47897 775 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 EMDP50402 254 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ADARB1P78563 741 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 CHRNB3Q05901 458 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TRAF3Q13114 568 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 VGLL4Q14135 290 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ZNF74Q16587 644 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SLC5A12Q1EHB4 618 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 PAN3Q58A45 887 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 TMEM31Q5JXX7 168 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 OTUD1Q5VV17 481 aaPredicted RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 TIGD3Q6B0B8 471 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 HACD2Q6Y1H2 254 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 FAM122BQ7Z309 247 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 HSD11B1LQ7Z5J1 315 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ZNF546Q86UE3 836 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 APRG1Q8IVJ8 170 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ZNF100Q8IYN0 542 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 FAM89BQ8N5H3 189 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TRAM1L1Q8N609 369 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 GVQW1Q8N7I0 195 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SNX31Q8N9S9 440 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TTC29Q8NA56 475 aaPredicted RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 OLIG1Q8TAK6 271 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 PLPPR1Q8TBJ4 325 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 AENQ8WTP8 325 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 TMEM239Q8WW34 195 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 CCDC127Q96BQ5 260 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 CCDC126Q96EE4 140 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 CAPNS2Q96L46 248 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 NIPSNAP3BQ9BS92 247 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TMEM121Q9BTD3 319 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 DGCR6LQ9BY27 220 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 SRRQ9GZT4 340 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TUBB1Q9H4B7 451 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 VCX3AQ9NNX9 186 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 CUTCQ9NTM9 273 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 TMEM30AQ9NV96 361 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 STMN3Q9NZ72 180 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ABCD2Q9UBJ2 740 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ASIC3Q9UHC3 531 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 ING1Q9UK53 422 aaPredicted RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 DHRS7Q9Y394 339 aa4□□□□□ -1.77
C11orf54-213ENST00000533585 EXOSC1Q9Y3B2 195 aaKnown RBP4□□□□□ -1.77
C11orf54-213ENST00000533585 EVC2Q86UK5 1308 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 TAF1P21675 1872 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 TRBV9A0A0B4J1U6 114 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 NPIPA5A0A0B4J1W7 369 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 TRBV4-1A0A0J9YWV2 114 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 FABP12A6NFH5 140 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 NPIPA5E9PKD4 350 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 LMO7DNF2Z398 122 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 TFECO14948 347 aaPredicted RBP3.99□□□□□ -1.77
C11orf54-213ENST00000533585 RAD51BO15315 384 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 PPIHO43447 177 aaKnown RBP3.99□□□□□ -1.77
C11orf54-213ENST00000533585 SNAI2O43623 268 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 XPNPEP2O43895 674 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 IGHG3P01860 377 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 KRT7P08729 469 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 HOXB2P14652 356 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 EFNA1P20827 205 aaPredicted RBP3.99□□□□□ -1.77
C11orf54-213ENST00000533585 BGNP21810 368 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 ATP5A1P25705 553 aaKnown RBP3.99□□□□□ -1.77
C11orf54-213ENST00000533585 HTR2CP28335 458 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 GDI2P50395 445 aaKnown RBP3.99□□□□□ -1.77
C11orf54-213ENST00000533585 LBX1P52954 281 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 GAS1P54826 345 aa3.99□□□□□ -1.77
C11orf54-213ENST00000533585 DCDC1P59894 354 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms