RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FAAHO00519 579 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 DYNC1I1O14576 645 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 CRHP06850 196 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 OPRM1P35372 400 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 SLC6A8P48029 635 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 EEF1A1P68104 462 aaKnown RBP18.36■□□□□ 0.53
CCS-208ENST00000533244 PON3Q15166 354 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 LIN52Q52LA3 116 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 COQ5Q5HYK3 327 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 RNF220Q5VTB9 566 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 OR2A2Q6IF42 318 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 VRK2Q86Y07 508 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 BBS10Q8TAM1 723 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 FNDC9Q8TBE3 224 aa18.36■□□□□ 0.53
CCS-208ENST00000533244 ZNF443Q9Y2A4 671 aaPredicted RBP18.36■□□□□ 0.53
CCS-208ENST00000533244 ITPR2Q14571 2701 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 EVPLLA8MZ36 301 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 TNFSF13O75888 250 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 PGM3O95394 542 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 OPN1LWP04000 364 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 EIF1AXP47813 144 aaKnown RBP18.35■□□□□ 0.53
CCS-208ENST00000533244 ASCL1P50553 236 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 GUSBP1Q15486 140 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 ADRM1Q16186 407 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 ZNF836Q6ZNA1 936 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 PLEKHM3Q6ZWE6 761 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 P4HA3Q7Z4N8 544 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 GCNT2Q8N0V5 402 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 MARVELD3Q96A59 401 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 INTS12Q96CB8 462 aaKnown RBP18.35■□□□□ 0.53
CCS-208ENST00000533244 COQ10BQ9H8M1 238 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 CHST2Q9Y4C5 530 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 MAST4O15021 2626 aa18.35■□□□□ 0.53
CCS-208ENST00000533244 A0A1W2PNV4 684 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 GJE1A6NN92 205 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 AP3D1O14617 1153 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 TNFSF11O14788 317 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 SLC22A2O15244 555 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 CXCL13O43927 109 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 FCGR2AP12318 317 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 COX6B1P14854 86 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 ETS2P15036 469 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 CDK6Q00534 326 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 NFYCQ13952 458 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 SGCBQ16585 318 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 ZSWIM7Q19AV6 140 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 EEF1A1P5Q5VTE0 462 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 HBMQ6B0K9 141 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 C3orf33Q6P1S2 294 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 NFKBIDQ8NI38 313 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 CCDC106Q9BWC9 280 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 RLIMQ9NVW2 624 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 PRDM4Q9UKN5 801 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 IFT52Q9Y366 437 aa18.34■□□□□ 0.53
CCS-208ENST00000533244 BBIP1A8MTZ0 92 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 SYT5O00445 386 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 AQP8O94778 261 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 PABPC4LP0CB38 370 aaKnown RBP18.33■□□□□ 0.53
CCS-208ENST00000533244 RYKP34925 604 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 SFTPDP35247 375 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 AGFG1P52594 562 aaKnown RBP18.33■□□□□ 0.53
CCS-208ENST00000533244 EPS8Q12929 822 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 SELPLGQ14242 412 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 LARS2Q15031 903 aaKnown RBP18.33■□□□□ 0.53
CCS-208ENST00000533244 MAPRE2Q15555 327 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 TRMT5Q32P41 509 aaKnown RBP18.33■□□□□ 0.53
CCS-208ENST00000533244 PDSS1Q5T2R2 415 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 REEP3Q6NUK4 255 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 GRINAQ7Z429 371 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 ZNF440Q8IYI8 595 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 SPATA9Q9BWV2 254 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 RSPO3Q9BXY4 272 aaPredicted RBP18.33■□□□□ 0.53
CCS-208ENST00000533244 TRIM8Q9BZR9 551 aa18.33■□□□□ 0.53
CCS-208ENST00000533244 C5orf58C9J3I9 102 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 FXYD1O00168 92 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 APOBEC1P41238 236 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 SEC24CP53992 1094 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 MTPNP58546 118 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 MERTKQ12866 999 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 TMEM176BQ3YBM2 270 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 MEX3BQ6ZN04 569 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 NET1Q7Z628 596 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 PTOV1Q86YD1 416 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 DMRTC2Q8IXT2 367 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 CLIP4Q8N3C7 705 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 ZNF563Q8TA94 476 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 OSTF1Q92882 214 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 PIGMQ9H3S5 423 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 KAT8Q9H7Z6 458 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 ZNF232Q9UNY5 417 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 CAPN7Q9Y6W3 813 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 NAV2Q8IVL1 2488 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 CFAP73A6NFT4 308 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 LSP1P33241 339 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 ACAA2P42765 397 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 KIR2DL2P43627 348 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 IDH2P48735 452 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 CARD18P57730 90 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 SCARB2Q14108 478 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 ZNF239Q16600 458 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms