RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PIGUQ9H490 435 aa11.46□□□□□ -0.57
COPB1-209ENST00000533096 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.57
COPB1-209ENST00000533096 C1orf109Q9NX04 203 aa11.46□□□□□ -0.57
COPB1-209ENST00000533096 TRAF6Q9Y4K3 522 aa11.46□□□□□ -0.57
COPB1-209ENST00000533096 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.57
COPB1-209ENST00000533096 ZNF724A8MTY0 619 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 SLC28A1O00337 649 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 SKAP2O75563 359 aaPredicted RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 H6PDO95479 791 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 LINC00032P0C843 101 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 MYL2P10916 166 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 CCNA2P20248 432 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 CCT3P49368 545 aaKnown RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 DIO1P49895 249 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 ATP12AP54707 1039 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 SELENBP1Q13228 472 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 TP53BP2Q13625 1128 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 MLC1Q15049 377 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 RFTN2Q52LD8 501 aaPredicted RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.45□□□□□ -0.58
COPB1-209ENST00000533096 TIFABQ6ZNK6 161 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 TOR1AIP2Q8NFQ8 470 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 OR5W2Q8NH69 310 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 PRR14Q9BWN1 585 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 ASB6Q9NWX5 421 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 TBK1Q9UHD2 729 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 FAF1Q9UNN5 650 aaPredicted RBP11.45□□□□□ -0.58
COPB1-209ENST00000533096 DTNAQ9Y4J8 743 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 CCL27Q9Y4X3 112 aa11.45□□□□□ -0.58
COPB1-209ENST00000533096 H7C417 338 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 ZNF264O43296 627 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 MRPL33O75394 65 aaKnown RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 HSPA4LO95757 839 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 IFI6P09912 130 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CSF3P09919 207 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 UROSP10746 265 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 SDC1P18827 310 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CDH2P19022 906 aaPredicted RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 COX5AP20674 150 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 NTF4P34130 210 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 NR4A2P43354 598 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 SUMO3P55854 103 aaPredicted RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 SESN3P58005 492 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 RPL38P63173 70 aaKnown RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 MERTKQ12866 999 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CBFBQ13951 182 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 GPR68Q15743 365 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 GABRA6Q16445 453 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 GALNTL6Q49A17 601 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 DCST2Q5T1A1 773 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 C12orf54Q6X4T0 127 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 TMPPEQ6ZT21 453 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 RELL1Q8IUW5 271 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CCDC103Q8IW40 242 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 ANKS4BQ8N8V4 417 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 WDR31Q8NA23 367 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CCDC63Q8NA47 563 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 OR7A2PQ8NGA2 310 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 OR52E4Q8NGH9 312 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 STACQ99469 402 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 FMO2Q99518 471 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 TRMOQ9BU70 441 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 ACTRT3Q9BYD9 372 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 PLA2G12AQ9BZM1 189 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 ACSS1Q9NUB1 689 aaPredicted RBP11.44□□□□□ -0.58
COPB1-209ENST00000533096 EMC3Q9P0I2 261 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 UPB1Q9UBR1 384 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 DCDC2Q9UHG0 476 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 MOKQ9UQ07 419 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 ACTL7BQ9Y614 415 aa11.44□□□□□ -0.58
COPB1-209ENST00000533096 CUBNO60494 3623 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 PRR14LQ5THK1 2151 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 LRP5LA4QPB2 252 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 G3V2L1 256 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 KLF11O14901 512 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 CFLARO15519 480 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 WIPF1O43516 503 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 UBL4AP11441 157 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 GCAP28676 217 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 RYKP34925 604 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 OR2B6P58173 313 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 CSNK2A1P68400 391 aaPredicted RBP11.43□□□□□ -0.58
COPB1-209ENST00000533096 PDZK1Q5T2W1 519 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 OLIG3Q7RTU3 272 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 MTDHQ86UE4 582 aaKnown RBP11.43□□□□□ -0.58
COPB1-209ENST00000533096 LSRQ86X29 649 aaPredicted RBP11.43□□□□□ -0.58
COPB1-209ENST00000533096 OR2T11Q8NH01 316 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 CCDC126Q96EE4 140 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 MUS81Q96NY9 551 aa11.43□□□□□ -0.58
COPB1-209ENST00000533096 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms