RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 LRRC74BQ6ZQY2 392 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 ABHD3Q8WU67 409 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 SLC38A5Q8WUX1 472 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 SPDL1Q96EA4 605 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 DNAJA3Q96EY1 480 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 GPATCH1Q9BRR8 931 aaKnown RBP13.88□□□□□ -0.19
CTSB-225ENST00000532409 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
CTSB-225ENST00000532409 MCTS1Q9ULC4 181 aaKnown RBP13.88□□□□□ -0.19
CTSB-225ENST00000532409 SLC35A3Q9Y2D2 325 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 IGHV3-15A0A0B4J1V0 119 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ETV2O00321 342 aaPredicted RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 MSTNO14793 375 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 CTAG2O75638 210 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 SYNGR4O95473 234 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 BCHEP06276 602 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 FCGR2AP12318 317 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 NID1P14543 1247 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 CCKARP32238 428 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ANXA11P50995 505 aaKnown RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 CARD18P57730 90 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 DSTNP60981 165 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 SELENBP1Q13228 472 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ZNF239Q16600 458 aaKnown RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 FAM214BQ7L5A3 538 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ZNF610Q8N9Z0 462 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 FAM222BQ8WU58 562 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 MAL2Q969L2 176 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 DNAJB12Q9NXW2 375 aaKnown RBP13.87□□□□□ -0.19
CTSB-225ENST00000532409 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
CTSB-225ENST00000532409 A0A096LPI6 279 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 CLIC1O00299 241 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 PLGP00747 810 aaPredicted RBP13.86□□□□□ -0.19
CTSB-225ENST00000532409 TFPTP0C1Z6 253 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 NCF2P19878 526 aaPredicted RBP13.86□□□□□ -0.19
CTSB-225ENST00000532409 ENPP1P22413 925 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 SORDQ00796 357 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 SQLEQ14534 574 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 MRPL2Q5T653 305 aaKnown RBP13.86□□□□□ -0.19
CTSB-225ENST00000532409 CDH24Q86UP0 819 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 KIF18BQ86Y91 864 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 WDR60Q8WVS4 1066 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 ST8SIA1Q92185 356 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 TMEM19Q96HH6 336 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 ZNF385DQ9H6B1 395 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 MTHFD2LQ9H903 347 aaPredicted RBP13.86□□□□□ -0.19
CTSB-225ENST00000532409 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 ACER3Q9NUN7 267 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 ITGB1BP2Q9UKP3 347 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 PROCRQ9UNN8 238 aa13.86□□□□□ -0.19
CTSB-225ENST00000532409 A0A0G2JND7 137 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 A6NNC1 897 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 SS18L1O75177 396 aaPredicted RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 GKN3PP0CG01 181 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 PGCP20142 388 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 CCNA2P20248 432 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 SLC7A1P30825 629 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 IDH2P48735 452 aaKnown RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 ATP4BP51164 291 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 EEF1A1P68104 462 aaKnown RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 TXNL4AP83876 142 aaKnown RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 POU4F3Q15319 338 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 RGNQ15493 299 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 PDSS1Q5T2R2 415 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 EEF1A1P5Q5VTE0 462 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 ZNF836Q6ZNA1 936 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 ZNF563Q8TA94 476 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 RNF128Q8TEB7 428 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 OIT3Q8WWZ8 545 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 GMPPAQ96IJ6 420 aaPredicted RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 OR5B2Q96R09 309 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 CCDC106Q9BWC9 280 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 OR11A1Q9GZK7 315 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 LIME1Q9H400 295 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 C12orf49Q9H741 205 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 SLC24A3Q9HC58 644 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 EXOSC3Q9NQT5 275 aaKnown RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 PAQR5Q9NXK6 330 aaPredicted RBP13.85□□□□□ -0.19
CTSB-225ENST00000532409 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 CHST2Q9Y4C5 530 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 DSPPQ9NZW4 1301 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 FREM1Q5H8C1 2179 aa13.85□□□□□ -0.19
CTSB-225ENST00000532409 TRBV5-3A0A0A0MS03 114 aa13.84□□□□□ -0.19
CTSB-225ENST00000532409 SH3D21A4FU49 640 aa13.84□□□□□ -0.19
CTSB-225ENST00000532409 GJE1A6NN92 205 aa13.84□□□□□ -0.19
CTSB-225ENST00000532409 DBIP07108 87 aaKnown RBP13.84□□□□□ -0.19
CTSB-225ENST00000532409 CD8BP10966 210 aa13.84□□□□□ -0.19
CTSB-225ENST00000532409 EPXP11678 715 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms