RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SGCBQ16585 318 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ZSWIM7Q19AV6 140 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 LIN52Q52LA3 116 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 MRPL2Q5T653 305 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 REEP3Q6NUK4 255 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ESPNLQ6ZVH7 1005 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 P4HA3Q7Z4N8 544 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 SPATA21Q7Z572 469 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 OR10D3Q8NH80 312 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 OR2V1Q8NHB1 315 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 NFKBIDQ8NI38 313 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 FIG4Q92562 907 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 INTS12Q96CB8 462 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF845Q96IR2 970 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 PINK1Q9BXM7 581 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 TMEM185BQ9H7F4 350 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 RLIMQ9NVW2 624 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 PAQR5Q9NXK6 330 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ARMCX1Q9P291 453 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF443Q9Y2A4 671 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 IFT52Q9Y366 437 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF175Q9Y473 711 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 CAPN7Q9Y6W3 813 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 GJE1A6NN92 205 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 FAAHO00519 579 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 TNFSF11O14788 317 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 NPPAP01160 153 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 DRD4P21917 467 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 BMP5P22003 454 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SHC1P29353 583 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 OPRM1P35372 400 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 APOBEC1P41238 236 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 IDH2P48735 452 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 AGFG1P52594 562 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CARD18P57730 90 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 MTPNP58546 118 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 GNGT1P63211 74 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 MERTKQ12866 999 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 FOXF2Q12947 444 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SELENBP1Q13228 472 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CYLC2Q14093 348 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SELPLGQ14242 412 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 PON3Q15166 354 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 TRMT5Q32P41 509 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 TMEM176BQ3YBM2 270 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 MMEL1Q495T6 779 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 PDSS1Q5T2R2 415 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 RNF220Q5VTB9 566 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 EEF1A1P5Q5VTE0 462 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 OR2A2Q6IF42 318 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF836Q6ZNA1 936 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 PLEKHM3Q6ZWE6 761 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CPLX4Q7Z7G2 160 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SNX32Q86XE0 403 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF440Q8IYI8 595 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CLIP4Q8N3C7 705 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 ACBD4Q8NC06 268 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 RELL2Q8NC24 303 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 ATP6V1C2Q8NEY4 427 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF563Q8TA94 476 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 FNDC9Q8TBE3 224 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 OSTF1Q92882 214 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 LRRC58Q96CX6 371 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SPATA9Q9BWV2 254 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 TRIM8Q9BZR9 551 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CACYBPQ9HB71 228 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 SERINC1Q9NRX5 453 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CHST2Q9Y4C5 530 aa11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 INTS1Q8N201 2190 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-216ENST00000529856 CFAP73A6NFT4 308 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 FXYD1O00168 92 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 AP3D1O14617 1153 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 MRASO14807 208 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CXCL13O43927 109 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 SNX3O60493 162 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 AQP8O94778 261 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CRHP06850 196 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC6A2P23975 617 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 SFTPDP35247 375 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 ACAA2P42765 397 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 EPS8Q12929 822 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 SCARB2Q14108 478 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CAPRIN1Q14444 709 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF311Q5JNZ3 666 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 HBMQ6B0K9 141 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 REP15Q6BDI9 236 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 GRINAQ7Z429 371 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 GCNT2Q8N0V5 402 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 PCYOX1LQ8NBM8 494 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 RP9Q8TA86 221 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms