RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	TIGAR	Q9NQ88	270 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ACOXL	Q9NUZ1	547 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	TXNL4B	Q9NX01	149 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FOXJ2	Q9P0K8	574 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	C5AR2	Q9P296	337 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	KLHL21	Q9UJP4	597 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	MKL2	Q9ULH7	1088 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	SCN3A	Q9NY46	2000 aa		13.46	□□□□□ -0.25
NR1H3-231	ENST00000529540		A8MV72	311 aa	Predicted RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	MYL12B	O14950	172 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	OR10H2	O60403	315 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	HCN1	O60741	890 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	LDB3	O75112	727 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CDC123	O75794	336 aa	Predicted RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CDRT1	O95170	752 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	HEXB	P07686	556 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	AZGP1	P25311	298 aa	Known RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	ELAVL4	P26378	380 aa	Known RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	GPC1	P35052	558 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	SLC9A3	P48764	834 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CASP9	P55211	416 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	SMIM11A	P58511	58 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	RPS15	P62841	145 aa	Known RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	GALK2	Q01415	458 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	C19orf57	Q0VDD7	668 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CYP27C1	Q4G0S4	372 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	VWA2	Q5GFL6	755 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	FAM198B	Q6UWH4	519 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CASP12	Q6UXS9	341 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	PEX5L	Q8IYB4	626 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	FAM26E	Q8N5C1	309 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM52	Q8NDY8	209 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	DGAT2	Q96PD7	388 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	TTYH2	Q9BSA4	534 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	POLDIP3	Q9BY77	421 aa	Known RBP	13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	MMP28	Q9H239	520 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	ACAD8	Q9UKU7	415 aa		13.46	□□□□□ -0.26
NR1H3-231	ENST00000529540	CEP250	Q9BV73	2442 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PMS2P1	A4D2B8	440 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	RAD1	O60671	282 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PDE9A	O76083	593 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	RAB36	O95755	333 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	SPTB	P11277	2137 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PTBP1	P26599	531 aa	Known RBP eCLIP	13.45	□□□□□ -0.26	2e-6	■■□□□ 13.8
NR1H3-231	ENST00000529540	ERP29	P30040	261 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	SOAT1	P35610	550 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	FEN1	P39748	380 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ARPC4	P59998	168 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRR5	P85299	388 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	QPRT	Q15274	297 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	NSDHL	Q15738	373 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	TAB1	Q15750	504 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF628	Q5EBL2	1059 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	DCST1	Q5T197	706 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	DDI2	Q5TDH0	399 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	SAXO2	Q658L1	398 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PGBD2	Q6P3X8	592 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	CD300LD	Q6UXZ3	194 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM64	Q6YI46	380 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	GPR32P1	Q8NGA4	272 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZFAND1	Q8TCF1	268 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	TTC9	Q92623	222 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ART5	Q96L15	291 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	SPSB2	Q99619	263 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	CRB3	Q9BUF7	120 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	VN1R1	Q9GZP7	353 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	GLIPR2	Q9H4G4	154 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	NIPAL2	Q9H841	368 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	RANGRF	Q9HD47	186 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ADAP2	Q9NPF8	381 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	ASCL3	Q9NQ33	180 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	MRPS18A	Q9NVS2	196 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	RHCG	Q9UBD6	479 aa		13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	NUFIP1	Q9UHK0	495 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-231	ENST00000529540	PTPRB	P23467	1997 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	IGKV3D-11	A0A0A0MRZ8	115 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	TCRBV16S1A1N1	A0A5B0	115 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	IRGM	A1A4Y4	181 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	FABP12	A6NFH5	140 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	IDS	B3KWA1	339 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	BRINP1	O60477	761 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	TP53	P04637	393 aa	Predicted RBP	13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	H1F0	P07305	194 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	C8orf89	P0DMQ9	161 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	TCN2	P20062	427 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	FOLR3	P41439	243 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	STAT5A	P42229	794 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	EMP2	P54851	167 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	FOXC1	Q12948	553 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	HNRNPA0	Q13151	305 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	ERV3-1	Q14264	604 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	SEC23B	Q15437	767 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	ELAVL1	Q15717	326 aa	Known RBP	13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRSS53	Q2L4Q9	553 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	PDZK1	Q5T2W1	519 aa		13.44	□□□□□ -0.26
NR1H3-231	ENST00000529540	LCN1P1	Q5VSP4	162 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms